RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 CAB39Q9Y376 341 aaPredicted RBP8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 SF3B6Q9Y3B4 125 aaKnown RBP8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 PEX16Q9Y5Y5 336 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 TEX13CA0A0J9YWL9 993 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 A0A1W2PQL4 384 aaPredicted RBP8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 CD8B2A6NJW9 211 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 D6RAR5 112 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNF354AO60765 605 aaPredicted RBP8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 SLC25A12O75746 678 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 CD8BP10966 210 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 PGCP20142 388 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 SLC2A5P22732 501 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 LCN1P31025 176 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 SDC2P34741 201 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 NAA10P41227 235 aaPredicted RBP8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 PPP5CP53041 499 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 CTXN1P60606 82 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 IFITM3Q01628 133 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 RUNX1T1Q06455 604 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 LTBQ06643 244 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 GALEQ14376 348 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 PON3Q15166 354 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 CACNA1EQ15878 2313 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 ALG10Q5BKT4 473 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 ARMC4Q5T2S8 1044 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 C1QL3Q5VWW1 255 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 SLC43A2Q8N370 569 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 SYT14Q8NB59 555 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 AGBL5Q8NDL9 886 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 NFAM1Q8NET5 270 aaPredicted RBP8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 OR6K6Q8NGW6 343 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 OR5W2Q8NH69 310 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZPLD1Q8TCW7 415 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 Q96M85 177 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 ADAM19Q9H013 955 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 ARRDC1-AS1Q9H2J1 176 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 MMP25Q9NPA2 562 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 ASB6Q9NWX5 421 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 GPN3Q9UHW5 284 aaPredicted RBP8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 DAPK2Q9UIK4 370 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 GSTK1Q9Y2Q3 226 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 PI4KAP42356 2102 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 ADAMTS9Q9P2N4 1935 aa8.67□□□□□ -1.02
COL6A4P1-201ENST00000446690 TEX51A0A1B0GUA7 166 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 A0A1W2PQD3 144 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 OR6C68A6NDL8 312 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 OR6C70A6NIJ9 312 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 VSTM2BA6NLU5 285 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 MAGEB4O15481 346 aaPredicted RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 FADS1O60427 444 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 EIF4E2O60573 245 aaKnown RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 CPNE3O75131 537 aaKnown RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 CAV3P56539 151 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 OR12D2P58182 307 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 HNRNPA0Q13151 305 aaKnown RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 IL11RAQ14626 422 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 QPRTQ15274 297 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNF385CQ66K41 422 aaPredicted RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 THOC7Q6I9Y2 204 aaKnown RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 LEG1Q6P5S2 330 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 JAZF1Q86VZ6 243 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 PARP16Q8N5Y8 322 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 NPEPL1Q8NDH3 523 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 C17orf47Q8NEP4 570 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNRF4Q8WWF5 429 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 MR1Q95460 341 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 C4orf36Q96KX1 117 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 CCNL2Q96S94 520 aaPredicted RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 DCLRE1CQ96SD1 692 aaKnown RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 SPSB2Q99619 263 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 SEMA4CQ9C0C4 833 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 GALNT9Q9HCQ5 603 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 NRIP3Q9NQ35 241 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 CRNNQ9UBG3 495 aaPredicted RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 A3GALT2U3KPV4 340 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 E9PI62 339 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 C11orf98E9PRG8 122 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 CASKO14936 926 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 MT-ND5P03915 603 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 KLK3P07288 261 aaPredicted RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 FGF5P12034 268 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 P2RX1P51575 399 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 RPS4XP62701 263 aaKnown RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 OXA1LQ15070 435 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 COL28A1Q2UY09 1125 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 TRIM16LQ309B1 348 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 SPANXN2Q5MJ10 180 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 NANOGNBQ7Z5D8 188 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 MARCH9Q86YJ5 346 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 RHBDD1Q8TEB9 315 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 TMCO6Q96DC7 493 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 TIMP4Q99727 224 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 WDR77Q9BQA1 342 aaPredicted RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 JAM3Q9BX67 310 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 RPRD1BQ9NQG5 326 aaKnown RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 POLE4Q9NR33 117 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 GRHPRQ9UBQ7 328 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 FBXO4Q9UKT5 387 aa8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 SIRT4Q9Y6E7 314 aaPredicted RBP8.66□□□□□ -1.02
COL6A4P1-201ENST00000446690 TMED7-TICAM2A0A0A6YYA0 188 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms