RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 DLGAP3O95886 979 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 COX6A1P12074 109 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 CD82P27701 267 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 CALRP27797 417 aaKnown RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 IDUAP35475 653 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 TGFBR2P37173 567 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 LIPAP38571 399 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 AQP2P41181 271 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 EFNA3P52797 238 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 ACTA2P62736 377 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 ACTG2P63267 376 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 MRPL28Q13084 256 aaKnown RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 KRR1Q13601 381 aaKnown RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 SGCBQ16585 318 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 FAM199XQ6PEV8 388 aaPredicted RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 THSD4Q6ZMP0 1018 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 NLGN4YQ8NFZ3 816 aaPredicted RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 OR4K13Q8NH42 304 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 MCFD2Q8NI22 146 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 SLC25A36Q96CQ1 311 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 SGCZQ96LD1 299 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 IMMP1LQ96LU5 166 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 C5orf34Q96MH7 638 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 SNX18Q96RF0 628 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 RASL10BQ96S79 203 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 KATNB1Q9BVA0 655 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 NRIP3Q9NQ35 241 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 CHRNA9Q9UGM1 479 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 TCFL5Q9UL49 500 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 HS3ST3B1Q9Y662 390 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 ADAMTS9Q9P2N4 1935 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 IGKV1D-42A0A075B6H8 117 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 IGLV3-32A0A0A0MS00 114 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 CDX4O14627 284 aaPredicted RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 PHYHO14832 338 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 SEC14L5O43304 696 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 GMFGO60234 142 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 ITGA10O75578 1167 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 IGHA1P01876 353 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 BGLAPP02818 100 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 HLA-DPB1P04440 258 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 SERPINA7P05543 415 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 ZNF182P17025 639 aaPredicted RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 CD53P19397 219 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 SDHAP31040 664 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 GBX2P52951 348 aaPredicted RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 RPS4XP62701 263 aaKnown RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 ERVK-25P63136 954 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 TPBGQ13641 420 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 CTF1Q16619 201 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 LCN10Q6JVE6 187 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 LEG1Q6P5S2 330 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 TMEM81Q6P7N7 255 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 FAM220AQ7Z4H9 259 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 BCDIN3DQ7Z5W3 292 aaKnown RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 EGFL6Q8IUX8 553 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 SCAIQ8N9R8 606 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 LSM14AQ8ND56 463 aaKnown RBP5.48□□□□□ -1.53
VPS50-205ENST00000441602 OR11G2Q8NGC1 345 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 OPALINQ96PE5 141 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 OR5M11Q96RB7 305 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 MMP27Q9H306 513 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 ZNF160Q9HCG1 818 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 NOX1Q9Y5S8 564 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 ZDBF2Q9HCK1 2354 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 TEX13CA0A0J9YWL9 993 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 PNMA8CA0A1B0GUJ8 204 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 FAM183AA6NL82 134 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 C12orf71A8MTZ7 269 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 RNF13O43567 381 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 RAD1O60671 282 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ADAM11O75078 769 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CBFA2T3O75081 653 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SERPINI2O75830 405 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SLC2A10O95528 541 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 TXNDC12O95881 172 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 P04436 131 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 UMODP07911 640 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 OR2T7P0C7T2 308 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 NR2C1P13056 603 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CPEP16870 476 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 NR4A1P22736 598 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 PCSK6P29122 969 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 RBMS1P29558 406 aaKnown RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 ETV5P41161 510 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 DIO1P49895 249 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 DAP3P51398 398 aaKnown RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 VBP1P61758 197 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 GPR50Q13585 617 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SPCS2Q15005 226 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 TRIP6Q15654 476 aaKnown RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 HES3Q5TGS1 186 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SLC22A10Q63ZE4 541 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 PAMR1Q6UXH9 720 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ZNF517Q6ZMY9 492 aaPredicted RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 SDR9C7Q8NEX9 313 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ATP6V1C2Q8NEY4 427 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 OR2T27Q8NH04 317 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 MFSD8Q8NHS3 518 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SMPDL3BQ92485 455 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms