RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 OPN1LWP04000 364 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 IMPDH2P12268 514 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 BMP7P18075 431 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 CSNK2A1P68400 391 aaPredicted RBP18.62■□□□□ 0.57
CHD3-204ENST00000439235 OR7A5Q15622 319 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 ZNF620Q6ZNG0 422 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 TMPPEQ6ZT21 453 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 NANOGNBQ7Z5D8 188 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 MEIOBQ8N635 442 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 Q8NA96 180 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 FANK1Q8TC84 345 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 MIB2Q96AX9 1013 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 WBP1Q96G27 269 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 MOGAT1Q96PD6 335 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 GABARAPL3Q9BY60 117 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 TSPAN10Q9H1Z9 355 aaPredicted RBP18.62■□□□□ 0.57
CHD3-204ENST00000439235 RIBC2Q9H4K1 309 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 NPIPA1Q9UND3 350 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 TRAPPC4Q9Y296 219 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 CDH10Q9Y6N8 788 aa18.62■□□□□ 0.57
CHD3-204ENST00000439235 A0A1B0GVC2 190 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 A0A1W2PNR3 127 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 FTCDNL1E5RQL4 147 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 SULT2B1O00204 365 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 SEC14L5O43304 696 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 FZD7O75084 574 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 RCBTB2O95199 551 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 ASAH2BP0C7U1 165 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 GRPRP30550 384 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 LHX2P50458 406 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 OR2B6P58173 313 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 ESRRGP62508 458 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 SLC35A1P78382 337 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 ZBED5Q49AG3 693 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 GGNQ86UU5 652 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 UBQLNLQ8IYU4 475 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 SLC43A2Q8N370 569 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 OR5J2Q8NH18 312 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 OR2V1Q8NHB1 315 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 RELTQ969Z4 430 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 DNAJA3Q96EY1 480 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 ZNF184Q99676 751 aaPredicted RBP18.61■□□□□ 0.57
CHD3-204ENST00000439235 TOR3AQ9H497 397 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 REV1Q9UBZ9 1251 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 SIGLEC7Q9Y286 467 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 PCNX3Q9H6A9 2034 aa18.61■□□□□ 0.57
CHD3-204ENST00000439235 A0A0J9YW62 118 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 H3BN98 237 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 AQP7O14520 342 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 EIF1AYO14602 144 aaKnown RBP18.6■□□□□ 0.57
CHD3-204ENST00000439235 TNFSF11O14788 317 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 DNPH1O43598 174 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 SOX14O95416 240 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 SNAP29O95721 258 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 ZNF708P17019 499 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 STARP49675 285 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 DIO1P49895 249 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 PRPS1P60891 318 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 LTBQ06643 244 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 ZIK1Q3SY52 487 aaPredicted RBP18.6■□□□□ 0.57
CHD3-204ENST00000439235 HBMQ6B0K9 141 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 VASNQ6EMK4 673 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 LRRC17Q8N6Y2 441 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 SCAIQ8N9R8 606 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 OR52L1Q8NGH7 329 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 TEX47Q8TBZ9 253 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 ZHX1-C8orf76Q96EF9 292 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 TIGARQ9NQ88 270 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 PLSCR2Q9NRY7 297 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 TBC1D23Q9NUY8 699 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 MRPL39Q9NYK5 338 aaKnown RBP18.6■□□□□ 0.57
CHD3-204ENST00000439235 HIF3AQ9Y2N7 669 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 NCKAP5O14513 1909 aa18.6■□□□□ 0.57
CHD3-204ENST00000439235 CELSR3Q9NYQ7 3312 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 TRAV27A0A087WT01 109 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 M0R082 166 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 DLGAP1O14490 977 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 CRISP1P54107 249 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 CLDN18P56856 261 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 CLDN20P56880 219 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 RPS3AP61247 264 aaKnown RBP18.59■□□□□ 0.57
CHD3-204ENST00000439235 RPS4XP62701 263 aaKnown RBP18.59■□□□□ 0.57
CHD3-204ENST00000439235 NPRL3Q12980 569 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 PMS2P3Q13401 168 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 SGCBQ16585 318 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 CTU2Q2VPK5 515 aaKnown RBP18.59■□□□□ 0.57
CHD3-204ENST00000439235 SLC36A3Q495N2 470 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 WLSQ5T9L3 541 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 ARHGAP11AQ6P4F7 1023 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 SMARCD3Q6STE5 483 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 ADPRHL1Q8NDY3 354 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 ZNF555Q8NEP9 628 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 OR51A7Q8NH64 312 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 ZNF417Q8TAU3 575 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 OSTF1Q92882 214 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 SARAFQ96BY9 339 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 ADGRG7Q96K78 797 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 GPR137Q96N19 417 aa18.59■□□□□ 0.57
CHD3-204ENST00000439235 ZNF587Q96SQ5 575 aaPredicted RBP18.59■□□□□ 0.57
CHD3-204ENST00000439235 MBOAT4Q96T53 435 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms