RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 GNG2P59768 71 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.68□□□□□ -1.02
CUX1-206ENST00000437600 TBRG1Q3YBR2 411 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 EIPR1Q53HC9 387 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 ZNF57Q68EA5 555 aaPredicted RBP8.68□□□□□ -1.02
CUX1-206ENST00000437600 APOOLQ6UXV4 268 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 C16orf47Q6ZP98 133 aaPredicted RBP8.68□□□□□ -1.02
CUX1-206ENST00000437600 IZUMO1Q8IYV9 350 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 LNX2Q8N448 690 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 SAMD12Q8N8I0 201 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 ZNF511Q8NB15 262 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 OR4D9Q8NGE8 314 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 CEP76Q8TAP6 659 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 DNASE2BQ8WZ79 361 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 GHSRQ92847 366 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 GAL3ST4Q96RP7 486 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 ELF4Q99607 663 aaPredicted RBP8.68□□□□□ -1.02
CUX1-206ENST00000437600 NKX3-1Q99801 234 aaPredicted RBP8.68□□□□□ -1.02
CUX1-206ENST00000437600 TMEM246Q9BRR3 403 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 MCCC2Q9HCC0 563 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 PDE7BQ9NP56 450 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 PRTFDC1Q9NRG1 225 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 DNAJB12Q9NXW2 375 aaKnown RBP8.68□□□□□ -1.02
CUX1-206ENST00000437600 RASD1Q9Y272 281 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 ARPC4-TTLL3A0A0A6YYG9 625 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 A0A0B4J2E0 115 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 A0A1B0GTH9 108 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 A0A1B0GX12 115 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 TRDV1A0A1B0GX56 115 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 SELENOFO60613 162 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 PTP4A3O75365 173 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 AGR2O95994 175 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 SBK2P0C263 348 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 DRD5P21918 477 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 CSF2RBP32927 897 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 CENPAP49450 140 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 ARL4DP49703 201 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 ARFIP1P53367 373 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 GPR50Q13585 617 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 FHL1Q13642 323 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 CD226Q15762 336 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 PRTGQ2VWP7 1150 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 ZFP69Q49AA0 526 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 VWA2Q5GFL6 755 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 OR5M10Q6IEU7 315 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 RAB43Q86YS6 212 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 UBQLNLQ8IYU4 475 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 OR6F1Q8NGZ6 308 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 OR51Q1Q8NH59 317 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 GCDHQ92947 438 aaPredicted RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 MED30Q96HR3 178 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 CCDC32Q9BV29 185 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 SRA1Q9HD15 236 aaKnown RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 ING1Q9UK53 422 aaPredicted RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 EXOGQ9Y2C4 368 aaKnown RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 CLDN16Q9Y5I7 305 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 GVINP1Q7Z2Y8 2422 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 AHCTF1Q8WYP5 2266 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 C2orf72A6NCS6 295 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 RIIAD1A6NNX1 92 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 OR2B3O76000 313 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 RPP14O95059 124 aaKnown RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 NKX2-2O95096 273 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 RCBTB2O95199 551 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 IGHA1P01876 353 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 TFP02787 698 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 FCER2P06734 321 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 THBS1P07996 1170 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 TFPIP10646 304 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 MAP3K8P41279 467 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 RAB38P57729 211 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 B2MP61769 119 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 ZNF85Q03923 595 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 ZNHIT3Q15649 155 aaPredicted RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 C1QL3Q5VWW1 255 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 MED25Q71SY5 747 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 KRT74Q7RTS7 529 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 ARHGEF39Q8N4T4 335 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 C19orf18Q8NEA5 215 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 MOSPD2Q8NHP6 518 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 PHOSPHO1Q8TCT1 267 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 DNAJA4Q8WW22 397 aaPredicted RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 TSLPQ969D9 159 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 TMCO6Q96DC7 493 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 TCTN2Q96GX1 697 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 VSTM2LQ96N03 204 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 ZFP3Q96NJ6 502 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 ADOQ96SZ5 270 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 GTPBP2Q9BX10 602 aaKnown RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 HDHD2Q9H0R4 259 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 OR10A5Q9H207 317 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 CMC2Q9NRP2 79 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 EXTL2Q9UBQ6 330 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 GMEB2Q9UKD1 530 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 A0A087WV62 115 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 CCDC182A6NF36 153 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 B4DXG7 233 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 J3QRE1 110 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 RNH1P13489 461 aaKnown RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 FOLR1P15328 257 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms