RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 OIT3Q8WWZ8 545 aa9.47□□□□□ -0.89
HDAC9-210ENST00000428307 SLC25A36Q96CQ1 311 aa9.47□□□□□ -0.89
HDAC9-210ENST00000428307 C4orf36Q96KX1 117 aa9.47□□□□□ -0.89
HDAC9-210ENST00000428307 TSSK2Q96PF2 358 aa9.47□□□□□ -0.89
HDAC9-210ENST00000428307 WDR77Q9BQA1 342 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-210ENST00000428307 TMEM43Q9BTV4 400 aa9.47□□□□□ -0.89
HDAC9-210ENST00000428307 POLE4Q9NR33 117 aa9.47□□□□□ -0.89
HDAC9-210ENST00000428307 DAPK2Q9UIK4 370 aa9.47□□□□□ -0.89
HDAC9-210ENST00000428307 TEX51A0A1B0GUA7 166 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 A0A1W2PQD3 144 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 OR6C70A6NIJ9 312 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 EIF4E2O60573 245 aaKnown RBP9.46□□□□□ -0.89
HDAC9-210ENST00000428307 PGCP20142 388 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 GTF2E2P29084 291 aaKnown RBP9.46□□□□□ -0.89
HDAC9-210ENST00000428307 CDKN2AP42771 156 aaKnown RBP9.46□□□□□ -0.89
HDAC9-210ENST00000428307 CTXN1P60606 82 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 RUNX1T1Q06455 604 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 HNRNPA0Q13151 305 aaKnown RBP9.46□□□□□ -0.89
HDAC9-210ENST00000428307 DNASE1L3Q13609 305 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 PON3Q15166 354 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 QPRTQ15274 297 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 CCDC157Q569K6 752 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 VASNQ6EMK4 673 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 DTWD2Q8NBA8 298 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 C17orf47Q8NEP4 570 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 OR6K6Q8NGW6 343 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 CHPT1Q8WUD6 406 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 CEP19Q96LK0 163 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 JAM3Q9BX67 310 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 SEMA4CQ9C0C4 833 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 CCDC86Q9H6F5 360 aaKnown RBP9.46□□□□□ -0.89
HDAC9-210ENST00000428307 GALNT9Q9HCQ5 603 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 ZNF346Q9UL40 294 aaKnown RBP9.46□□□□□ -0.89
HDAC9-210ENST00000428307 GSTK1Q9Y2Q3 226 aa9.46□□□□□ -0.89
HDAC9-210ENST00000428307 TMEM200CA6NKL6 621 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 VSTM2BA6NLU5 285 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 ARPC3O15145 178 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 SLC25A12O75746 678 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 TFP02787 698 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 HLA-DPB1P04440 258 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 HIST1H2ABP04908 130 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 SYPP08247 313 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 ASAH2BP0C7U1 165 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 GP1BBP13224 206 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 LCN1P31025 176 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 TNFSF8P32971 234 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 HOXD12P35452 270 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 DUSP3P51452 185 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-210ENST00000428307 P2RX1P51575 399 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 E2F1Q01094 437 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 ZNF85Q03923 595 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 RPL18Q07020 188 aaKnown RBP9.46□□□□□ -0.9
HDAC9-210ENST00000428307 CBFBQ13951 182 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 TRIM16LQ309B1 348 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 TBC1D25Q3MII6 688 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 SPANXN2Q5MJ10 180 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 ARMC4Q5T2S8 1044 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 BICRALQ6AI39 1079 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 LEG1Q6P5S2 330 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 ARL9Q6T311 187 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 HIST3H2AQ7L7L0 130 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 CPEB2Q7Z5Q1 589 aaKnown RBP9.46□□□□□ -0.9
HDAC9-210ENST00000428307 SLC43A2Q8N370 569 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 AGBL5Q8NDL9 886 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 HIST1H2ACQ93077 130 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 SLC25A46Q96AG3 418 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 COX4I2Q96KJ9 171 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 CCNL2Q96S94 520 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-210ENST00000428307 RPRD1BQ9NQG5 326 aaKnown RBP9.46□□□□□ -0.9
HDAC9-210ENST00000428307 KLHL21Q9UJP4 597 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 HIF3AQ9Y2N7 669 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 TTC28Q96AY4 2481 aa9.46□□□□□ -0.9
HDAC9-210ENST00000428307 TRDV1A0A1B0GX56 115 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 GABRPO00591 440 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 CASKO14936 926 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 IL1AP01583 271 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 MT-ND5P03915 603 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 CD14P08571 375 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 CD40LGP29965 261 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 PYCR1P32322 319 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 ACVR1BP36896 505 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 SLC3A1Q07837 685 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 ACSM1Q08AH1 577 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 COL28A1Q2UY09 1125 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 CD200R1LQ6Q8B3 271 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 NANOGNBQ7Z5D8 188 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 MARCH9Q86YJ5 346 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 LAX1Q8IWV1 398 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 ARIH2OSQ8N7S6 290 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 OR11A1Q9GZK7 315 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 ARRDC1-AS1Q9H2J1 176 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 SMURF1Q9HCE7 757 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 TRIM36Q9NQ86 728 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 RHBDL2Q9NX52 303 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 HAO2Q9NYQ3 351 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 CRNNQ9UBG3 495 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-210ENST00000428307 ZMIZ1Q9ULJ6 1067 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 GRIP1Q9Y3R0 1128 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 A0A075B6Q4 140 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 SHISA3A0PJX4 238 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms