RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 MRPS14O60783 128 aaKnown RBP9.83□□□□□ -0.84
TCOF1-204ENST00000427724 PDGFAP04085 211 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 FCER2P06734 321 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 SLC35E2P0CK97 266 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 CHMP24386 653 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 NUP62P37198 522 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-204ENST00000427724 IFITM3Q01628 133 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 DSG2Q14126 1118 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 SLC23A3Q6PIS1 610 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF619Q8N2I2 560 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 NEIL3Q8TAT5 605 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 SLC7A6Q92536 515 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 PITX2Q99697 317 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 ERVMER34-1Q9H9K5 563 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 RXFP3Q9NSD7 469 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 EMC3Q9P0I2 261 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 EXTL2Q9UBQ6 330 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 KCNN3Q9UGI6 736 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 CD160O95971 181 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 IRF2P14316 349 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF20P17024 532 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 MSX1P28360 303 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 PRKXP51817 358 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 LIM2P55344 173 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 GGTA1PQ4G0N0 100 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 ESCO2Q56NI9 601 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 TCTN3Q6NUS6 607 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 SLC46A3Q7Z3Q1 461 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 TOMM5Q8N4H5 51 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 SETD6Q8TBK2 473 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 CA5BP1Q8WTZ4 195 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 DNAJA4Q8WW22 397 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-204ENST00000427724 NKD1Q969G9 470 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 CLDN23Q96B33 292 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 GLTPQ9NZD2 209 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 TMEFF2Q9UIK5 374 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-204ENST00000427724 LRIT2A6NDA9 550 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 LYRM1O43325 122 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 OR2T1O43869 369 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 PPM1BO75688 479 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 GASTP01350 101 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 GCH1P30793 250 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 SCRN3Q0VDG4 424 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 DBPQ10586 325 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-204ENST00000427724 MAP4K2Q12851 820 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 AIMP2Q13155 320 aaKnown RBP9.83□□□□□ -0.84
TCOF1-204ENST00000427724 ALG1LQ6GMV1 187 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 SLC25A45Q8N413 288 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 CT55Q8WUE5 264 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 C16orf58Q96GQ5 468 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 DPAGT1Q9H3H5 408 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 CHMP1AQ9HD42 196 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-204ENST00000427724 NDRG4Q9ULP0 352 aaKnown RBP9.83□□□□□ -0.84
TCOF1-204ENST00000427724 TMEM5Q9Y2B1 443 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 YARS2Q9Y2Z4 477 aaKnown RBP9.83□□□□□ -0.84
TCOF1-204ENST00000427724 DOCK6Q96HP0 2047 aa9.83□□□□□ -0.84
TCOF1-204ENST00000427724 A0A075B6Q4 140 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 CD8B2A6NJW9 211 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 H7C2Y5 167 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 ITGA10O75578 1167 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 IGHV3-9P01782 118 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 WNT1P04628 370 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 CD8BP10966 210 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 MAGEA2P43356 314 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 OMPP47874 163 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 CAMK2BQ13554 666 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 SYPL1Q16563 259 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 OLIG3Q7RTU3 272 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 BCDIN3DQ7Z5W3 292 aaKnown RBP9.82□□□□□ -0.84
TCOF1-204ENST00000427724 CHST4Q8NCG5 386 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 SECISBP2Q96T21 854 aaKnown RBP9.82□□□□□ -0.84
TCOF1-204ENST00000427724 PINK1Q9BXM7 581 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 A0A0C4DFX4 3053 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 OTOGLQ3ZCN5 2332 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 FXYD6-FXYD2A0A087WZ82 144 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 TRBV4-1A0A0J9YWV2 114 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 FAM90A27PA6NNH2 459 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 H0YIV9 168 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 UPK1AO00322 258 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 PROM1O43490 865 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 CLUP10909 449 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 LCN1P31025 176 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 GCGRP47871 477 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 CTXN1P60606 82 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 TRA2BP62995 288 aaKnown RBP9.82□□□□□ -0.84
TCOF1-204ENST00000427724 C17orf67Q0P5P2 114 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 CDC20Q12834 499 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF791Q3KP31 576 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-204ENST00000427724 MFSD4AQ8N468 514 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 OR5M1Q8NGP8 315 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 PMM1Q92871 262 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 EID2BQ96D98 161 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 MS4A6EQ96DS6 147 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 TRIB1Q96RU8 372 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 FXYD6Q9H0Q3 95 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 QPCTLQ9NXS2 382 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 CNIH4Q9P003 139 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 RBBP6Q7Z6E9 1792 aaKnown RBP9.82□□□□□ -0.84
TCOF1-204ENST00000427724 PLSCR5A0PG75 271 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 TGFBR2P37173 567 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms