RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 VAPAQ9P0L0 249 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 TRAPPC4Q9Y296 219 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 ZNF716A6NP11 495 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 A8MV72 311 aaPredicted RBP11.23□□□□□ -0.61
SGCE-203ENST00000425444 KCNAB3O43448 404 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 KLF4O43474 513 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 SPRY1O43609 319 aaPredicted RBP11.23□□□□□ -0.61
SGCE-203ENST00000425444 MRPL33O75394 65 aaKnown RBP11.23□□□□□ -0.61
SGCE-203ENST00000425444 PGM3O95394 542 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 ARAFP10398 606 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 PRG2P13727 222 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 ETS2P15036 469 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 EDNRAP25101 427 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 ACAA2P42765 397 aaKnown RBP11.23□□□□□ -0.61
SGCE-203ENST00000425444 CEACAM7Q14002 265 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 SCARB2Q14108 478 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 VEZF1Q14119 521 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 OR7A5Q15622 319 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 REEP3Q6NUK4 255 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 CASP12Q6UXS9 341 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 CCDC103Q8IW40 242 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 TMEM171Q8WVE6 324 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 USB1Q9BQ65 265 aaKnown RBP11.23□□□□□ -0.61
SGCE-203ENST00000425444 SPATA5L1Q9BVQ7 753 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 ADAM19Q9H013 955 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 RPS6KB2Q9UBS0 482 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 NDUFAF1Q9Y375 327 aa11.23□□□□□ -0.61
SGCE-203ENST00000425444 CIB4A0PJX0 185 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 CCT8L1PA6NM43 557 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 A8MVM7 634 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 RAMP1O60894 148 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 GPIP06744 558 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 TROVE2P10155 538 aaKnown RBP eCLIP11.22□□□□□ -0.61
SGCE-203ENST00000425444 COX5AP20674 150 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 SLC6A2P23975 617 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 LOXP28300 417 aaPredicted RBP11.22□□□□□ -0.61
SGCE-203ENST00000425444 GTF2E2P29084 291 aaKnown RBP11.22□□□□□ -0.61
SGCE-203ENST00000425444 AQP1P29972 269 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 PRKAR1BP31321 381 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 SLC16A1P53985 500 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 NCALDP61601 193 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 HOXC5Q00444 222 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 BNIP2Q12982 314 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 TAB1Q15750 504 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 CYP51A1Q16850 503 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 CLEC12BQ2HXU8 276 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 OTUD3Q5T2D3 398 aaPredicted RBP11.22□□□□□ -0.61
SGCE-203ENST00000425444 PAQR6Q6TCH4 344 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 C10orf111Q8N326 155 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 HSD17B8Q92506 261 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 C3orf49Q96BT1 292 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 CPPED1Q9BRF8 314 aaPredicted RBP11.22□□□□□ -0.61
SGCE-203ENST00000425444 TMEM120AQ9BXJ8 343 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 REG4Q9BYZ8 158 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 CXorf56Q9H5V9 222 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 ESRP2Q9H6T0 727 aaKnown RBP11.22□□□□□ -0.61
SGCE-203ENST00000425444 SLC52A3Q9NQ40 469 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 ADPRHL2Q9NX46 363 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 SLC13A4Q9UKG4 626 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 PRDM4Q9UKN5 801 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 ANGPT4Q9Y264 503 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 SLC9A8Q9Y2E8 581 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 CHST2Q9Y4C5 530 aa11.22□□□□□ -0.61
SGCE-203ENST00000425444 RAI1Q7Z5J4 1906 aaPredicted RBP11.21□□□□□ -0.61
SGCE-203ENST00000425444 TRBV5-3A0A0A0MS03 114 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 PRORSD1PA6NEY8 169 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 LIPT2A6NK58 231 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 ELOA3DA6NLF2 546 aaPredicted RBP11.21□□□□□ -0.61
SGCE-203ENST00000425444 CLOCKO15516 846 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 RAD51DO75771 328 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 AKR7A3O95154 331 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 AHSA1O95433 338 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 CD3EP07766 207 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 PAX1P15863 534 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 GGT1P19440 569 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 IGHV1-2P23083 117 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 MTPNP58546 118 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 SRSF2Q01130 221 aaKnown RBP11.21□□□□□ -0.61
SGCE-203ENST00000425444 NFYCQ13952 458 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 ELOA3BQ3SY89 546 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 FBXW9Q5XUX1 488 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 GPAT4Q86UL3 456 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 HIPK4Q8NE63 616 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 ELOA3Q8NG57 546 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 RNF217Q8TC41 542 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 SLC35B4Q969S0 331 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 MUCL1Q96DR8 90 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 ZNF607Q96SK3 696 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 IKZF5Q9H5V7 419 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 ZNF385DQ9H6B1 395 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 TMEM38AQ9H6F2 299 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 ZNF701Q9NV72 531 aaPredicted RBP11.21□□□□□ -0.61
SGCE-203ENST00000425444 ASB6Q9NWX5 421 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 UPB1Q9UBR1 384 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 CDC42EP3Q9UKI2 254 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 RNF115Q9Y4L5 304 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 FLVCR1Q9Y5Y0 555 aa11.21□□□□□ -0.61
SGCE-203ENST00000425444 SERPINB7O75635 380 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 PLAUP00749 431 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 VIMP08670 466 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms