RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 SLCO5A1Q9H2Y9 848 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 ELOVL3Q9HB03 270 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 SMCHD1A6NHR9 2005 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 NPIPA5A0A0B4J1W7 369 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 A0A0J9YY10 115 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 C17orf105B2RV13 164 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 NPIPA7E9PJI5 369 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 KCNK5O95279 499 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 HBQ1P09105 142 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 NPIPA8P0DM63 369 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 CASP6P55212 293 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 SPOCK1Q08629 439 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 ECH1Q13011 328 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 C1orf61Q13536 156 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 HIST2H3PS2Q5TEC6 136 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 ABHD12BQ7Z5M8 362 aaPredicted RBP12.87□□□□□ -0.35
SREBF2-202ENST00000424354 SIAH3Q8IW03 269 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 ST7LQ8TDW4 575 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 OR5M11Q96RB7 305 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 ACKR4Q9NPB9 350 aa12.87□□□□□ -0.35
SREBF2-202ENST00000424354 TMEM269A0A1B0GVZ9 245 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 B4DXG7 233 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 FBXO24O75426 580 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 GABRR1P24046 479 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 LIPAP38571 399 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 EFNA3P52797 238 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SNRPGP62308 76 aaKnown RBP12.86□□□□□ -0.35
SREBF2-202ENST00000424354 CPXM2Q8N436 756 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 BBS1Q8NFJ9 593 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 TMEM40Q8WWA1 233 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 DTD2Q96FN9 168 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 LRRC46Q96FV0 321 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SCML1Q9UN30 329 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 TRIM64BA6NI03 449 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SLC9B1P1A6NJY1 282 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SLC16A7O60669 478 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 CPNE6O95741 557 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 EN2P19622 333 aaPredicted RBP12.86□□□□□ -0.35
SREBF2-202ENST00000424354 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 OR4K15Q8NH41 348 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 C20orf85Q9H1P6 137 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 CHRDQ9H2X0 955 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 OTOL1A6NHN0 477 aaPredicted RBP12.86□□□□□ -0.35
SREBF2-202ENST00000424354 F5H5K5 113 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 STK17BO94768 372 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 NUDT1P36639 197 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SF3B4Q15427 424 aaKnown RBP eCLIP12.86□□□□□ -0.355e-7■■■■□ 22.2
SREBF2-202ENST00000424354 SLC22A6Q4U2R8 563 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SLX4IPQ5VYV7 408 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 ZNF852Q6ZMS4 543 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 FAM160A2Q8N612 972 aaPredicted RBP12.86□□□□□ -0.35
SREBF2-202ENST00000424354 OR52R1Q8NGF1 315 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SLC6A20Q9NP91 592 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SMCO4Q9NRQ5 59 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 A0A0B4J2A0 478 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 IRF2P14316 349 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 NTSR1P30989 418 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 UBE2NP61088 152 aaKnown RBP12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SLC9A3R2Q15599 337 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 PKDCCQ504Y2 493 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 MRPL21Q7Z2W9 205 aaKnown RBP12.86□□□□□ -0.35
SREBF2-202ENST00000424354 TMEM200AQ86VY9 491 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 L3MBTL4Q8NA19 623 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 OR56B1Q8NGI3 324 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 OR52I1Q8NGK6 324 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 GHSRQ92847 366 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SLC35B4Q969S0 331 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 PKMYT1Q99640 499 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 C8orf33Q9H7E9 229 aaPredicted RBP12.86□□□□□ -0.35
SREBF2-202ENST00000424354 FBXO8Q9NRD0 319 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SHPKQ9UHJ6 478 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 RARRES3Q9UL19 164 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 USP3Q9Y6I4 520 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 A0A1W2PPV4 95 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 ASAH1Q13510 395 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 Q499Y3 187 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 ARSJQ5FYB0 599 aaPredicted RBP12.86□□□□□ -0.35
SREBF2-202ENST00000424354 KIAA0895LQ68EN5 471 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 PAPD4Q6PIY7 484 aaKnown RBP12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SLC43A2Q8N370 569 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 PPP1R35Q8TAP8 253 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 A4GALTQ9NPC4 353 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 KCMF1Q9P0J7 381 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 SNX11Q9Y5W9 270 aa12.86□□□□□ -0.35
SREBF2-202ENST00000424354 D6RAR5 112 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 M6PRP20645 277 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 CNR1P21554 472 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 SHC1P29353 583 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 HOXA9P31269 272 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 GPR176Q14439 515 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 GPR155Q7Z3F1 870 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 TECPR1Q7Z6L1 1165 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 SLC38A5Q8WUX1 472 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 KLF16Q9BXK1 252 aaPredicted RBP12.85□□□□□ -0.35
SREBF2-202ENST00000424354 ANKRD19PQ9H560 264 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 ASIC5Q9NY37 505 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 GMPR2Q9P2T1 348 aaKnown RBP12.85□□□□□ -0.35
SREBF2-202ENST00000424354 ADAM10O14672 748 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 SEC14L5O43304 696 aa12.85□□□□□ -0.35
SREBF2-202ENST00000424354 SMAD6O43541 496 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms