RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 HEATR1Q9H583 2144 aaKnown RBP11.38□□□□□ -0.59
LINC00339-202ENST00000416769 PRAMEF27A3QJZ7 478 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 TMEM247A6NEH6 219 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 SCDO00767 359 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 GSC2O15499 205 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 DNAJA2O60884 412 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 NUDT14O95848 222 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 YES1P07947 543 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 TFPTP0C1Z6 253 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 ARAFP10398 606 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 PRKCAP17252 672 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 LCN1P31025 176 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 OR3A2P47893 321 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 LIPEQ05469 1076 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 ITGADQ13349 1161 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 GNA13Q14344 377 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 ADRM1Q16186 407 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 ZSCAN26Q16670 478 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 GCNT6Q5T4J0 391 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 C11orf71Q6IPW1 123 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 ERICH5Q6P6B1 374 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 C10orf111Q8N326 155 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 OR10H5Q8NGA6 315 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 TMEM158Q8WZ71 300 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 HSD17B8Q92506 261 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 CPNE4Q96A23 557 aaPredicted RBP11.37□□□□□ -0.59
LINC00339-202ENST00000416769 TRNT1Q96Q11 434 aaKnown RBP11.37□□□□□ -0.59
LINC00339-202ENST00000416769 SDF2Q99470 211 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 A4GALTQ9NPC4 353 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 UBQLN4Q9NRR5 601 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 CALML5Q9NZT1 146 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 STOML1Q9UBI4 398 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 P2RX2Q9UBL9 471 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 CD300AQ9UGN4 299 aa11.37□□□□□ -0.59
LINC00339-202ENST00000416769 FAM220BPB1ANY3 271 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 BCAS1O75363 584 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-202ENST00000416769 DNAJC8O75937 253 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-202ENST00000416769 PRKD3O94806 890 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 IFNA2P01563 188 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 NUDT7P0C024 238 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 FAM157CP0CG43 387 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 NR2F1P10589 423 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 HSD17B1P14061 328 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 HPGDP15428 266 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 NTF4P34130 210 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 ZNF83P51522 516 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 NUDT6P53370 316 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 NCALDP61601 193 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 PPA1Q15181 289 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 RNPS1Q15287 305 aaKnown RBP11.36□□□□□ -0.59
LINC00339-202ENST00000416769 SYPL1Q16563 259 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 VMACQ2NL98 169 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 KLHL26Q53HC5 615 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 SAMD4BQ5PRF9 694 aaKnown RBP11.36□□□□□ -0.59
LINC00339-202ENST00000416769 DCST2Q5T1A1 773 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 PDSS1Q5T2R2 415 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 PRAMEF8Q5VWM4 474 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 PRAMEF7Q5VXH5 474 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 LRRC74BQ6ZQY2 392 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 Q6ZT83 130 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 C16orf62Q7Z3J2 963 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 PTOV1Q86YD1 416 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 SLC30A8Q8IWU4 369 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 ZNF614Q8N883 585 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 C11orf65Q8NCR3 313 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 OR52N5Q8NH56 324 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 GPR119Q8TDV5 335 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 SLC38A5Q8WUX1 472 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 PMM1Q92871 262 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 REXO5Q96IC2 774 aaKnown RBP11.36□□□□□ -0.59
LINC00339-202ENST00000416769 C1QTNF6Q9BXI9 259 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 HDHD5Q9BXW7 423 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 SAP130Q9H0E3 1048 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 MMADHCQ9H3L0 296 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-202ENST00000416769 ALG2Q9H553 416 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 BCL2L10Q9HD36 194 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 FANCFQ9NPI8 374 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 POLE3Q9NRF9 147 aa11.36□□□□□ -0.59
LINC00339-202ENST00000416769 ANK2Q01484 3957 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 A0A0G2JPF8 293 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 A0A1W2PQD3 144 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 ELOVL7A1L3X0 281 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 PRORSD1PA6NEY8 169 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 HNRNPCL2B2RXH8 293 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 HNRNPCL3B7ZW38 293 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 STX11O75558 287 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 RAD51DO75771 328 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 HNRNPCL4P0DMR1 293 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 IGHV4-31P0DP07 118 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 COX5AP20674 150 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 ELK4P28324 431 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 GSK3BP49841 420 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 CRISP3P54108 245 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 CDK6Q00534 326 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 QPRTQ15274 297 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 MAPK11Q15759 364 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 CYP51A1Q16850 503 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 GPAT3Q53EU6 434 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 GTF2IRD2BQ6EKJ0 949 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 REEP3Q6NUK4 255 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms