RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ADIPOQQ15848 244 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PDCD2Q16342 344 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TMEM225Q6GV28 225 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ANKRD16Q6P6B7 361 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 OR1K1Q8NGR3 316 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 C1orf159Q96HA4 380 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TRNT1Q96Q11 434 aaKnown RBP12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 KATNB1Q9BVA0 655 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ADAM19Q9H013 955 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 RAB1BQ9H0U4 201 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 SLC38A1Q9H2H9 487 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PLK3Q9H4B4 646 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CFAP73A6NFT4 308 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 AQP7P3A6NL99 342 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ZNF587BE7ETH6 402 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NR5A2O00482 541 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 FAAHO00519 579 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TCF21O43680 179 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PDE5AO76074 875 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 STAMBPO95630 424 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NUDT17P0C025 328 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 UQCRBP14927 111 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 IL7RP16871 459 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PAX7P23759 505 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PPOXP50336 477 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 IDH3GP51553 393 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TUBA1BP68363 451 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TUBA4AP68366 448 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NAAAQ02083 359 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 EPS8Q12929 822 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 GNA13Q14344 377 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 EFNB3Q15768 340 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 MRPL2Q5T653 305 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TUBA1AQ71U36 451 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 RNF130Q86XS8 419 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 RFLNBQ8N5W9 214 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 WDR60Q8WVS4 1066 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 BCL2L2Q92843 193 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TESCQ96BS2 214 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ZIM3Q96PE6 472 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TAPBPLQ9BX59 468 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PIF1Q9H611 641 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 MTHFD2LQ9H903 347 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ADPRHL2Q9NX46 363 aa12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TMEFF2Q9UIK5 374 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB2-229ENST00000411527 A0A096LPE4 126 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 A0A1W2PPZ6 126 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ITM2AO43736 263 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CHRM4P08173 479 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CECR9P0C854 216 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 DAOP14920 347 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 GIFP27352 417 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CALCRP30988 508 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 IL2RGP31785 369 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 SRP14P37108 136 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 SELENOPP49908 381 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CHN2P52757 468 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 BNIP2Q12982 314 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 GSTA3Q16772 222 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 SPANXN4Q5MJ08 99 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LRRC74BQ6ZQY2 392 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CREB3L2Q70SY1 520 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NUDCD3Q8IVD9 361 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ZCCHC24Q8N2G6 241 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 RIBC1Q8N443 379 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 OR4F15Q8NGB8 312 aa12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ALKBH3Q96Q83 286 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CRNNQ9UBG3 495 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ARPC4-TTLL3A0A0A6YYG9 625 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CCDC154A6NI56 674 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 VSTM5A8MXK1 200 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LILRA1O75019 489 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 UPK3AO75631 287 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 SNUPNO95149 360 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 VAMP5O95183 116 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 DBIP07108 87 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ERCC1P07992 297 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 GKN3PP0CG01 181 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NR2F1P10589 423 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CREB1P16220 341 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ITGA2P17301 1181 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 APEX1P27695 318 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 S100A3P33764 101 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 HGFACQ04756 655 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ZSWIM7Q19AV6 140 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 DPY19L1Q2PZI1 675 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 C3orf36Q3SXR2 165 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 FAM174BQ3ZCQ3 159 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NIPAL3Q6P499 406 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LINGO2Q7L985 606 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ZNF440Q8IYI8 595 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CADM2Q8N3J6 435 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ZNF781Q8N8C0 355 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LINC01356Q8N9X3 169 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 MAGEE2Q8TD90 523 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NEU4Q8WWR8 484 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 HPS1Q92902 700 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CCDC115Q96NT0 180 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 SNX18Q96RF0 628 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 SEC61A2Q9H9S3 476 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms