RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 TIMM22Q9Y584 194 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 AUP1Q9Y679 476 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RYR3Q15413 4870 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TMED7-TICAM2A0A0A6YYA0 188 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 A0A1W2PPW3 197 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC22A23A1A5C7 686 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 HMX2A2RU54 273 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CLPSL1A2RUU4 121 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAM181BA6NEQ2 426 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 AGAP5A6NIR3 686 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC22A31A6NKX4 558 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 AQP7P3A6NL99 342 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 DUXAA6NLW8 204 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 A8MT66 165 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 C17orf100A8MU93 164 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM229AB2RXF0 380 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CLDN25C9JDP6 229 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 H3BQF6 201 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCDC188H7C350 402 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TPD52L2O43399 206 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 AKAP10O43572 662 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CDC14BO60729 498 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TBX19O60806 448 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SCN2BO60939 215 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SEC22BO75396 215 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 DEAF1O75398 565 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ERLIN1O75477 346 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CRCPO75575 148 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 UPK3AO75631 287 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 RSL1D1O76021 490 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 NCR1O76036 304 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SEC14L2O76054 403 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF432O94892 652 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 VAMP5O95183 116 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 GPANK1O95872 356 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 AK1P00568 194 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CSTAP01040 98 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 NGFP01138 241 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 IGHV2-5P01817 119 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MT-ND5P03915 603 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 GPIP06744 558 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CELA3BP08861 270 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 UBTFL6P0CB48 400 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 NAT2P11245 290 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 UQCRBP14927 111 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SELEP16581 610 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCNA2P20248 432 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TAC1P20366 129 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 IMPDH1P20839 514 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CDC25BP30305 580 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 LSP1P33241 339 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 GLRXP35754 106 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 PGM1P36871 562 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 RBMXP38159 391 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 FRKP42685 505 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CRYBB2P43320 205 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ALDH3B1P43353 468 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MAGEA4P43358 317 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MAGEB1P43366 347 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 HTR3AP46098 478 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ASMTP46597 345 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CAPZA2P47755 286 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 IDH2P48735 452 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCT3P49368 545 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SELENOPP49908 381 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 RAG2P55895 527 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 LOXL3P58215 753 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TUBA1BP68363 451 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TUBA4AP68366 448 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCL8P80075 99 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 LCN2P80188 198 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ARF1P84077 181 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 GALK2Q01415 458 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ROR2Q01974 943 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 GUCY2DQ02846 1103 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC3A1Q07837 685 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SRSF4Q08170 494 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 LCP2Q13094 533 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SKP2Q13309 424 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TP53BP2Q13625 1128 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 PDE7AQ13946 482 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 HLXQ14774 488 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MAD2L1BPQ15013 274 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 PDCD1Q15116 288 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 GPR68Q15743 365 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAM189A2Q15884 450 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF141Q15928 474 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 UAP1Q16222 522 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TAF9Q16594 264 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MOGQ16653 247 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 NKPD1Q17RQ9 610 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MSMPQ1L6U9 139 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 HFEQ30201 348 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRMT5Q32P41 509 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 PCGF3Q3KNV8 242 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SPDYE7PQ495Y7 208 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 GLIPR1L2Q4G1C9 344 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 UNC50Q53HI1 259 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF385BQ569K4 471 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF678Q5SXM1 525 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms