RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ZNF572Q7Z3I7 529 aaPredicted RBP14.39□□□□□ -0.11
CHMP3-203ENST00000409225 ARFGAP2Q8N6H7 521 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 ACMSDQ8TDX5 336 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 SLC6A7Q99884 636 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 SUCNR1Q9BXA5 334 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 ATAD3AQ9NVI7 634 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 DCDC2Q9UHG0 476 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 OSGIN1Q9UJX0 560 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 PYCARDQ9ULZ3 195 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 IGHV2OR16-5A0A0B4J2B6 119 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 A0A0G2JK05 382 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 ZC3H12DA2A288 527 aaKnown RBP14.38□□□□□ -0.11
CHMP3-203ENST00000409225 CLDN24A6NM45 220 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 TMEM114B3SHH9 223 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 AP3D1O14617 1153 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 CHEK2O96017 543 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 AVPP01185 164 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 PROCP04070 461 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 COL8A2P25067 703 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 SELENOPP49908 381 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 POLR2HP52434 150 aaKnown RBP14.38□□□□□ -0.11
CHMP3-203ENST00000409225 HBA1P69905 142 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 PTGR1Q14914 329 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 MIDNQ504T8 468 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 ELFN2Q5R3F8 820 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 C6orf120Q7Z4R8 191 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 KRTCAP2Q8N6L1 136 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 PMM1Q92871 262 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 SLC35G5Q96KT7 338 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 SF3B5Q9BWJ5 86 aaKnown RBP14.38□□□□□ -0.11
CHMP3-203ENST00000409225 OR51I1Q9H343 314 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 NELFAQ9H3P2 528 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 ESM1Q9NQ30 184 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 EXD2Q9NVH0 621 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 DNAJC15Q9Y5T4 150 aa14.38□□□□□ -0.11
CHMP3-203ENST00000409225 TRAV20A0A0B4J274 112 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 ZNF208O43345 1280 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 IGKV3-15P01624 115 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 HPXP02790 462 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 TCN1P20061 433 aaPredicted RBP14.37□□□□□ -0.11
CHMP3-203ENST00000409225 MAPK1P28482 360 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 TACR3P29371 465 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 PLAURQ03405 335 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 NPRL3Q12980 569 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 SNTB2Q13425 540 aaKnown RBP14.37□□□□□ -0.11
CHMP3-203ENST00000409225 CEACAM7Q14002 265 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 DAG1Q14118 895 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 OR7A5Q15622 319 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 KANK2Q63ZY3 851 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 TYW3Q6IPR3 259 aaKnown RBP14.37□□□□□ -0.11
CHMP3-203ENST00000409225 KRT80Q6KB66 452 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 NIPAL3Q6P499 406 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 TREML4Q6UXN2 200 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 RNF165Q6ZSG1 346 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 TEX29Q8N6K0 151 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 NATD1Q8N6N6 113 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 ZDHHC22Q8N966 263 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 CCDC63Q8NA47 563 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 MAGEE2Q8TD90 523 aaPredicted RBP14.37□□□□□ -0.11
CHMP3-203ENST00000409225 MRPL24Q96A35 216 aaKnown RBP14.37□□□□□ -0.11
CHMP3-203ENST00000409225 C1orf50Q9BV19 199 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 RACGAP1Q9H0H5 632 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 EXOSC3Q9NQT5 275 aaKnown RBP14.37□□□□□ -0.11
CHMP3-203ENST00000409225 OXSMQ9NWU1 459 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 REV1Q9UBZ9 1251 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 TBK1Q9UHD2 729 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 CMAHPQ9Y471 501 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 WDR45Q9Y484 360 aa14.37□□□□□ -0.11
CHMP3-203ENST00000409225 PRKDCP78527 4128 aaKnown RBP14.36□□□□□ -0.11
CHMP3-203ENST00000409225 RNF103-CHMP3A0A140T963 221 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 AQP7P3A6NL99 342 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 TMEM233B4DJY2 109 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 SCN2BO60939 215 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 PEX11AO75192 247 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 GLRA3O75311 464 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 UPK3AO75631 287 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 GPIP06744 558 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 OR12D1P0DN82 309 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 CBR1P16152 277 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 KCNJ10P78508 379 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 FAM169BQ8N8A8 192 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 TWIST2Q8WVJ9 160 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 XAGE5Q8WWM1 108 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 CNOT9Q92600 299 aaKnown RBP14.36□□□□□ -0.11
CHMP3-203ENST00000409225 RAB8BQ92930 207 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 COQ8BQ96D53 544 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 ZG16BQ96DA0 208 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 ZNF317Q96PQ6 595 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-203ENST00000409225 PRPF18Q99633 342 aaKnown RBP14.36□□□□□ -0.11
CHMP3-203ENST00000409225 DUSP26Q9BV47 211 aa14.36□□□□□ -0.11
CHMP3-203ENST00000409225 MRPL37Q9BZE1 423 aaKnown RBP14.36□□□□□ -0.11
CHMP3-203ENST00000409225 MOV10Q9HCE1 1003 aaKnown RBP14.36□□□□□ -0.11
CHMP3-203ENST00000409225 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-203ENST00000409225 A0A1W2PPM1 405 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 LIPT2A6NK58 231 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 PIP5K1BO14986 540 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 PPIHO43447 177 aaKnown RBP14.35□□□□□ -0.11
CHMP3-203ENST00000409225 SYNGR3O43761 229 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 PLIN3O60664 434 aa14.35□□□□□ -0.11
CHMP3-203ENST00000409225 BCL10O95999 233 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms