RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 GXYLT1Q4G148 440 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 CMPK2Q5EBM0 449 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 C19orf48Q6RUI8 117 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 Q6ZPB1 254 aaPredicted RBP18.41■□□□□ 0.54
CHKB-201ENST00000406938 MFSD8Q8NHS3 518 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 TFAP2CQ92754 450 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 PNPLA2Q96AD5 504 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 KLHL15Q96M94 604 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 MCCC2Q9HCC0 563 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 FAM118AQ9NWS6 357 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 HDGFL3Q9Y3E1 203 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 LIPT2A6NK58 231 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 GJE1A6NN92 205 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 HCN1O60741 890 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 CAPGP40121 348 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 STARP49675 285 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 CLDN20P56880 219 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 RPS4XP62701 263 aaKnown RBP18.41■□□□□ 0.54
CHKB-201ENST00000406938 ADARB1P78563 741 aaKnown RBP18.41■□□□□ 0.54
CHKB-201ENST00000406938 ZBED5Q49AG3 693 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 WLSQ5T9L3 541 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 MAMDC2Q7Z304 686 aaPredicted RBP18.41■□□□□ 0.54
CHKB-201ENST00000406938 GGNQ86UU5 652 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 CLDN22Q8N7P3 220 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 ZNF555Q8NEP9 628 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 OR8D4Q8NGM9 314 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 NEIL3Q8TAT5 605 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 TNFRSF13CQ96RJ3 184 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 TAPBPLQ9BX59 468 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 OR52D1Q9H346 318 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 LDAHQ9H6V9 325 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 SEC14L4Q9UDX3 406 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 IL20RAQ9UHF4 553 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 RAB26Q9ULW5 256 aa18.41■□□□□ 0.54
CHKB-201ENST00000406938 MED12Q93074 2177 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 H0YC42 278 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 SEC14L5O43304 696 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 PTP4A3O75365 173 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 GRPRP30550 384 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 TPD52P55327 224 aaPredicted RBP18.4■□□□□ 0.54
CHKB-201ENST00000406938 NUP107P57740 925 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 SMARCD3Q6STE5 483 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 NANOGNBQ7Z5D8 188 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 UBQLNLQ8IYU4 475 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 TEX47Q8TBZ9 253 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 MIB2Q96AX9 1013 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 ZNF570Q96NI8 536 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 TBC1D23Q9NUY8 699 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 IL20Q9NYY1 176 aa18.4■□□□□ 0.54
CHKB-201ENST00000406938 TRGV5A0A0B4J1U4 118 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 H0YAE9 185 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 M0R082 166 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 CLIC3O95833 236 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 GTF2E2P29084 291 aaKnown RBP18.39■□□□□ 0.53
CHKB-201ENST00000406938 DIO1P49895 249 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 LHX2P50458 406 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 MFSD13AQ14CX5 517 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 PTGES3Q15185 160 aaKnown RBP18.39■□□□□ 0.53
CHKB-201ENST00000406938 CTU2Q2VPK5 515 aaKnown RBP18.39■□□□□ 0.53
CHKB-201ENST00000406938 CLEC12AQ5QGZ9 265 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 RPL13AP3Q6NVV1 102 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 THSD4Q6ZMP0 1018 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 SIAH3Q8IW03 269 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 EXD3Q8N9H8 876 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 ZNF417Q8TAU3 575 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 SAMD8Q96LT4 415 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 ZNF587Q96SQ5 575 aaPredicted RBP18.39■□□□□ 0.53
CHKB-201ENST00000406938 ASPNQ9BXN1 380 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 EXO5Q9H790 373 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 ALKBH4Q9NXW9 302 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 HIF3AQ9Y2N7 669 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 ACACBO00763 2458 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 FREM3P0C091 2139 aa18.39■□□□□ 0.53
CHKB-201ENST00000406938 SPENQ96T58 3664 aaKnown RBP18.39■□□□□ 0.53
CHKB-201ENST00000406938 A0A0J9YW62 118 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 LOC100130705A0A1B0GUX0 176 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 E9PQ18 207 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 BLOC1S5-TXNDC5H3BN57 136 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 EIF1AYO14602 144 aaKnown RBP18.38■□□□□ 0.53
CHKB-201ENST00000406938 TNFSF11O14788 317 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 BCKDKO14874 412 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 SLC16A6O15403 523 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 FZD7O75084 574 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 RCBTB2O95199 551 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 IGHG3P01860 377 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 HIST1H2ABP04908 130 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 GNAO1P09471 354 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 BMP7P18075 431 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 TMEM236Q5W0B7 351 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 TTC23Q5W5X9 447 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 TMPPEQ6ZT21 453 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 HIST3H2AQ7L7L0 130 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 IQCF1Q8N6M8 205 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 Q8NA96 180 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 OR52L1Q8NGH7 329 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 OR5J2Q8NH18 312 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 OSTF1Q92882 214 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 HIST1H2ACQ93077 130 aa18.38■□□□□ 0.53
CHKB-201ENST00000406938 ABTB1Q969K4 478 aaPredicted RBP18.38■□□□□ 0.53
CHKB-201ENST00000406938 PITX2Q99697 317 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms