RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 IQCF2Q8IXL9 164 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF100Q8IYN0 542 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 DEFB123Q8N688 67 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 FRMD1Q8N878 549 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 C16orf52Q8NHV5 167 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 STT3BQ8TCJ2 826 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 RAB40AQ8WXH6 277 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 TTC9Q92623 222 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 IP6K3Q96PC2 410 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CDC6Q99741 560 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 WDR77Q9BQA1 342 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CHRDQ9H2X0 955 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 WDR76Q9H967 626 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 FGF20Q9NP95 211 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 C14orf119Q9NWQ9 140 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 VNN3Q9NY84 501 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEFF2Q9UIK5 374 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 PCDHGA3Q9Y5H0 932 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 V9GY05 133 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 MYO16Q9Y6X6 1858 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 LOC102725191A0A1B0GVB3 256 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CDC14CA4D256 554 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 IDSB3KWA1 339 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 H0YC42 278 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 PSMD9O00233 223 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 NARSO43776 548 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 IFNA21P01568 189 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 H2AFB2P0C5Z0 115 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 MSL3P1P0C860 447 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 ERP29P30040 261 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 TNFSF8P32971 234 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 RPS5P46782 204 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 RRADP55042 308 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 PCBD1P61457 104 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 LPAL2Q16609 132 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 C1orf140Q5VVS0 124 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 HBMQ6B0K9 141 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC16A9Q7RTY1 509 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 ABHD12BQ7Z5M8 362 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CLEC1AQ8NC01 280 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 FER1L6-AS2Q96M78 137 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CITED4Q96RK1 184 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CSF3RQ99062 836 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CACNG6Q9BXT2 260 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 FKRPQ9H9S5 495 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 TXNL4BQ9NX01 149 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 ERVK13-1Q9NX77 482 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 EMC3Q9P0I2 261 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 NUFIP1Q9UHK0 495 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 MBD1Q9UIS9 605 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 KCND3Q9UK17 655 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 MCTS1Q9ULC4 181 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 RNF215Q9Y6U7 377 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 A0A1W2PPK0 400 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 A0A1W2PPV9 198 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 TVP23AA6NH52 213 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 OTOL1A6NHN0 477 aaPredicted RBP4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 OR6C70A6NIJ9 312 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF878C9JN71 531 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 PRAMEF4O60810 478 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 PRAF2O60831 178 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 CTSVO60911 334 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM127O75204 238 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 SBK2P0C263 348 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 GTF2F2P13984 249 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 GALNSP34059 522 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 SFTPDP35247 375 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 GFERP55789 205 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 CHAF1BQ13112 559 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 PLEKHN1Q494U1 663 aaPredicted RBP4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 ABCA11PQ4W5N1 156 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF628Q5EBL2 1059 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 PRAMEF9Q5VWM5 478 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 C12orf73Q69YU5 71 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 OLIG3Q7RTU3 272 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 DND1Q8IYX4 353 aaKnown RBP4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 SYS1Q8N2H4 156 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 RCBTB1Q8NDN9 531 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 OR1J4Q8NGS1 313 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 IFI44Q8TCB0 444 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 TM9SF4Q92544 642 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 RPL3LQ92901 407 aaKnown RBP4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 MSLNLQ96KJ4 702 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 OR5M11Q96RB7 305 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 ZPBPQ9BS86 351 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 SARGQ9BW04 601 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF226Q9NYT6 803 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 WIF1Q9Y5W5 379 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 ZSWIM8A7E2V4 1837 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 IQCMA0A1B0GVH7 501 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 A0A1W2PPC1 479 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 A6NCN8 305 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 FAM171A2A8MVW0 826 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 WRBO00258 174 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 SOCS6O14544 535 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 IMPA2O14732 288 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 PPM1DO15297 605 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 LYRM1O43325 122 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 PIP5K1CO60331 668 aa4.36□□□□□ -1.71
PCDH11X-207ENST00000406881 VAMP5O95183 116 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms