RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 RNF122Q9H9V4 155 aa26.23■■□□□ 1.79
USP42-202ENST00000404008 ERRFI1Q9UJM3 462 aaPredicted RBP26.23■■□□□ 1.79
USP42-202ENST00000404008 NCOA6Q14686 2063 aaPredicted RBP26.23■■□□□ 1.79
USP42-202ENST00000404008 EIF1BO60739 113 aaKnown RBP26.22■■□□□ 1.79
USP42-202ENST00000404008 RRM2P31350 389 aa26.22■■□□□ 1.79
USP42-202ENST00000404008 CEACAM8P31997 349 aaPredicted RBP26.22■■□□□ 1.79
USP42-202ENST00000404008 ACTR3P61158 418 aa26.22■■□□□ 1.79
USP42-202ENST00000404008 RIPPLY2Q5TAB7 128 aa26.22■■□□□ 1.79
USP42-202ENST00000404008 MTFR2Q6P444 385 aa26.22■■□□□ 1.79
USP42-202ENST00000404008 FCRLAQ7L513 359 aa26.22■■□□□ 1.79
USP42-202ENST00000404008 PFN4Q8NHR9 129 aa26.22■■□□□ 1.79
USP42-202ENST00000404008 SLC25A36Q96CQ1 311 aa26.22■■□□□ 1.79
USP42-202ENST00000404008 MED31Q9Y3C7 131 aa26.22■■□□□ 1.79
USP42-202ENST00000404008 GCN1Q92616 2671 aaKnown RBP26.22■■□□□ 1.79
USP42-202ENST00000404008 ERICH4A6NGS2 130 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 RCBTB2O95199 551 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 GADD45GO95257 159 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 IGF2P01344 180 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 BGLAPP02818 100 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 SMIM11AP58511 58 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 ADORA2A-AS1P86434 159 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 LTBQ06643 244 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 KPNB1Q14974 876 aaKnown RBP26.21■■□□□ 1.79
USP42-202ENST00000404008 FGD3Q5JSP0 725 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 PAQR6Q6TCH4 344 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 OR52J3Q8NH60 311 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 MOGAT1Q96PD6 335 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 FUZQ9BT04 418 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 KLHL4Q9C0H6 718 aa26.21■■□□□ 1.79
USP42-202ENST00000404008 HELZ2Q9BYK8 2649 aaKnown RBP26.21■■□□□ 1.79
USP42-202ENST00000404008 A0A087WUU8 490 aa26.2■■□□□ 1.79
USP42-202ENST00000404008 TRBV4-1A0A0J9YWV2 114 aa26.2■■□□□ 1.79
USP42-202ENST00000404008 ZNF814B7Z6K7 855 aa26.2■■□□□ 1.79
USP42-202ENST00000404008 FKBP6O75344 327 aa26.2■■□□□ 1.79
USP42-202ENST00000404008 IL2RAP01589 272 aa26.2■■□□□ 1.79
USP42-202ENST00000404008 LSM11P83369 360 aaKnown RBP eCLIP26.2■■□□□ 1.79
USP42-202ENST00000404008 OR2A2Q6IF42 318 aa26.2■■□□□ 1.79
USP42-202ENST00000404008 PODNL1Q6PEZ8 512 aa26.2■■□□□ 1.79
USP42-202ENST00000404008 RND1Q92730 232 aa26.2■■□□□ 1.79
USP42-202ENST00000404008 DUS3LQ96G46 650 aaKnown RBP26.2■■□□□ 1.79
USP42-202ENST00000404008 A0A0G2JNJ9 132 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 ENO4A6NNW6 628 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 LRRN3E7EW58 273 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 PIP5K1CO60331 668 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 CYTIPO60759 359 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 AKR7A3O95154 331 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 MFSD13AQ14CX5 517 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 ZNF74Q16587 644 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 ABLIM2Q6H8Q1 611 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 OR2T5Q6IEZ7 315 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 TBPL2Q6SJ96 375 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 ZNF730Q6ZMV8 503 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 MBOAT2Q6ZWT7 520 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 RNF113BQ8IZP6 322 aaKnown RBP26.2■■□□□ 1.78
USP42-202ENST00000404008 SLC43A2Q8N370 569 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 C10orf53Q8N6V4 93 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 NAXEQ8NCW5 288 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 OR2T29Q8NH02 315 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 ABHD3Q8WU67 409 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 ZFP3Q96NJ6 502 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 NAA11Q9BSU3 229 aaPredicted RBP26.2■■□□□ 1.78
USP42-202ENST00000404008 YY1AP1Q9H869 796 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 C20orf141Q9NUB4 165 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 Q9UFV3 132 aa26.2■■□□□ 1.78
USP42-202ENST00000404008 KRT36O76013 467 aa26.19■■□□□ 1.78
USP42-202ENST00000404008 MT-ATP6P00846 226 aa26.19■■□□□ 1.78
USP42-202ENST00000404008 GTF2E2P29084 291 aaKnown RBP26.19■■□□□ 1.78
USP42-202ENST00000404008 PER3P56645 1201 aa26.19■■□□□ 1.78
USP42-202ENST00000404008 RNPS1Q15287 305 aaKnown RBP26.19■■□□□ 1.78
USP42-202ENST00000404008 SEC23BQ15437 767 aa26.19■■□□□ 1.78
USP42-202ENST00000404008 OTUD3Q5T2D3 398 aaPredicted RBP26.19■■□□□ 1.78
USP42-202ENST00000404008 NRMQ8IXM6 262 aa26.19■■□□□ 1.78
USP42-202ENST00000404008 TMEM99Q8N816 258 aa26.19■■□□□ 1.78
USP42-202ENST00000404008 DENND2DQ9H6A0 471 aaPredicted RBP26.19■■□□□ 1.78
USP42-202ENST00000404008 LYVE1Q9Y5Y7 322 aa26.19■■□□□ 1.78
USP42-202ENST00000404008 AQP7P3A6NL99 342 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 RAMP1O60894 148 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 CH25HO95992 272 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 CBLP22681 906 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 GRPRP30550 384 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 LIMS1P48059 325 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 P2RY4P51582 365 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 CTBP2P56545 445 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 GTF2IRD2BQ6EKJ0 949 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 SLC46A3Q7Z3Q1 461 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 GTF2IRD2Q86UP8 949 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 CCDC103Q8IW40 242 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 GCNT2Q8N0V5 402 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 PIGXQ8TBF5 258 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 INTS12Q96CB8 462 aaKnown RBP26.18■■□□□ 1.78
USP42-202ENST00000404008 FKRPQ9H9S5 495 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 SEC14L4Q9UDX3 406 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 CORINQ9Y5Q5 1042 aa26.18■■□□□ 1.78
USP42-202ENST00000404008 HTR3EA5X5Y0 456 aa26.17■■□□□ 1.78
USP42-202ENST00000404008 HSPB2A8KAH6 182 aa26.17■■□□□ 1.78
USP42-202ENST00000404008 M0R082 166 aa26.17■■□□□ 1.78
USP42-202ENST00000404008 CST1P01037 141 aa26.17■■□□□ 1.78
USP42-202ENST00000404008 TMIGD3P0DMS9 266 aaPredicted RBP26.17■■□□□ 1.78
USP42-202ENST00000404008 HMGA2P52926 109 aa26.17■■□□□ 1.78
USP42-202ENST00000404008 PRKCDQ05655 676 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms