RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 MRPL40Q9NQ50 206 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CUTCQ9NTM9 273 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 PAQR5Q9NXK6 330 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 MSRB1Q9NZV6 116 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF282Q9UDV7 671 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 PLLPQ9Y342 182 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 V9GYY9 64 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 WDR17Q8IZU2 1322 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 SYNJ2O15056 1496 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 A0A087WZ39 114 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 IGHV4-28A0A0C4DH34 117 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 TRBV4-1A0A0J9YWV2 114 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 LILRA5A6NI73 299 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 SNURFLB1AK76 121 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 F8VP50 259 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 H3BQV1 296 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 AQP9O43315 295 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 PCDH7O60245 1069 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 ZMPSTE24O75844 475 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 BMP15O95972 392 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 IFNA2P01563 188 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 KRT16P08779 473 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 HBQ1P09105 142 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 CTXN2P0C2S0 81 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 PRSS56P0CW18 603 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 PSMC3P17980 439 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 GIFP27352 417 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 HLA-DMAP28067 261 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 SSTR2P30874 369 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 MAP3K8P41279 467 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 HSPA13P48723 471 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 TGM4P49221 684 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 PCYT1AP49585 367 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 KPNA2P52292 529 aaKnown RBP4.28□□□□□ -1.72
GABPB1-204ENST00000396464 MLLT10P55197 1068 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 CDH11P55287 796 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 KRTAP10-9P60411 292 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 MYL7Q01449 175 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 ZBTB6Q15916 424 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 DUSP5Q16690 384 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 KCTD19Q17RG1 926 aaPredicted RBP4.28□□□□□ -1.72
GABPB1-204ENST00000396464 FNBP1LQ5T0N5 605 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF425Q6IV72 752 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 APOBEC3HQ6NTF7 200 aaKnown RBP4.28□□□□□ -1.72
GABPB1-204ENST00000396464 CD300LGQ6UXG3 332 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF836Q6ZNA1 936 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 LINC00336Q6ZUF6 198 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 SETD3Q86TU7 594 aaPredicted RBP4.28□□□□□ -1.72
GABPB1-204ENST00000396464 ODF3L1Q8IXM7 274 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 MCOLN2Q8IZK6 566 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 OR2L13Q8N349 312 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 METTL4Q8N3J2 472 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 SLC37A3Q8NCC5 494 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 C19orf18Q8NEA5 215 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 CATSPER1Q8NEC5 780 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 OR2T12Q8NG77 320 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 OR10V1Q8NGI7 309 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 OR5M1Q8NGP8 315 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 OR6X1Q8NH79 312 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 DNAJB3Q8WWF6 145 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 BAALCQ8WXS3 180 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 TADA1Q96BN2 335 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 CCDC126Q96EE4 140 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 CELF6Q96J87 481 aaKnown RBP4.28□□□□□ -1.72
GABPB1-204ENST00000396464 BEX2Q9BXY8 128 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 ACTR3CQ9C0K3 210 aaPredicted RBP4.28□□□□□ -1.72
GABPB1-204ENST00000396464 CENPHQ9H3R5 247 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 FNDC4Q9H6D8 234 aaPredicted RBP4.28□□□□□ -1.72
GABPB1-204ENST00000396464 NIPAL2Q9H841 368 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 FOLH1BQ9HBA9 442 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 APOBEC3GQ9HC16 384 aaKnown RBP4.28□□□□□ -1.72
GABPB1-204ENST00000396464 RETNQ9HD89 108 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 C3orf18Q9UK00 162 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 SLC7A7Q9UM01 511 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 SCML2Q9UQR0 700 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 SLC17A4Q9Y2C5 497 aa4.28□□□□□ -1.72
GABPB1-204ENST00000396464 YARS2Q9Y2Z4 477 aaKnown RBP4.28□□□□□ -1.72
GABPB1-204ENST00000396464 WDR97A6NE52 1622 aa4.28□□□□□ -1.73
GABPB1-204ENST00000396464 EIF4G3O43432 1585 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 SPATA31D1Q6ZQQ2 1576 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ADGRA3Q8IWK6 1321 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 RAD50Q92878 1312 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 POLA1P09884 1462 aaPredicted RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 SLC22A20A6NK97 555 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 PRMT5O14744 637 aaPredicted RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 TM9SF1O15321 606 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 PPIHO43447 177 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 SYNGR3O43761 229 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 XPNPEP2O43895 674 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 VAMP5O95183 116 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 LDOC1O95751 146 aaPredicted RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 CD160O95971 181 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 FGGP02679 453 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 IFNA6P05013 189 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ATP1A1P05023 1023 aaKnown RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 MGMTP16455 207 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF7P17097 686 aaPredicted RBP4.27□□□□□ -1.73
GABPB1-204ENST00000396464 ITGA2P17301 1181 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 IVDP26440 423 aa4.27□□□□□ -1.73
GABPB1-204ENST00000396464 PSMB5P28074 263 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms