RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 CORINQ9Y5Q5 1042 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 SOCS6O14544 535 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 SMAD9O15198 467 aaKnown RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 EIF4E2O60573 245 aaKnown RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 FPR3P25089 353 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 LTBRP36941 435 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 CARD18P57730 90 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 SIRPAP78324 504 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 FIP1L1Q6UN15 594 aaKnown RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 UNQ6126/PRO20091Q6UXV3 157 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 DNAJC22Q8N4W6 341 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 UCN3Q969E3 161 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC41A2Q96JW4 573 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 PIGQQ9BRB3 760 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 SEMA4CQ9C0C4 833 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 BABAM2Q9NXR7 383 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 EMC3Q9P0I2 261 aa12.07□□□□□ -0.48
PTPRN2-202ENST00000389416 CCDC187A0A096LP49 1063 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 MAKP20794 623 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 P2RX1P51575 399 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 DUSP8Q13202 625 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF425Q6IV72 752 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 ABHD12BQ7Z5M8 362 aaPredicted RBP12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 CAMKMTQ7Z624 323 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 NARS2Q96I59 477 aaKnown RBP12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 URM1Q9BTM9 101 aaKnown RBP12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 OR11A1Q9GZK7 315 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 CST11Q9H112 138 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 IRF2BPLQ9H1B7 796 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC25A18Q9H1K4 315 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 CALHM2Q9HA72 323 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF701Q9NV72 531 aaPredicted RBP12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 LRFN1Q9P244 771 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 TMEM269A0A1B0GVZ9 245 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 ASPDHA6ND91 283 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 LRRN3E7EW58 273 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 MTRF1O75570 445 aaKnown RBP12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 MT-CO3P00414 261 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 IGFBP1P08833 259 aaPredicted RBP12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC35A1P78382 337 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 PLK5Q496M5 336 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 PIWIL3Q7Z3Z3 882 aaKnown RBP12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 DMRTB1Q96MA1 342 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 ELOVL3Q9HB03 270 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 A0A1W2PPC1 479 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 EEF1E1O43324 174 aaKnown RBP12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 AKR7A3O95154 331 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 PDGFBP01127 241 aaPredicted RBP12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 CAPNS1P04632 268 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 UCHL1P09936 223 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 RFC3P40938 356 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 SF3B4Q15427 424 aaKnown RBP eCLIP12.06□□□□□ -0.484e-7■■□□□ 13.7
PTPRN2-202ENST00000389416 ACSM3Q53FZ2 586 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 SPIN3Q5JUX0 258 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 RIMKLAQ8IXN7 391 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC37A3Q8NCC5 494 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 OR5T2Q8NGG2 359 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 SLCO4A1Q96BD0 722 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 RASD2Q96D21 266 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 WDR34Q96EX3 536 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 BCL2L10Q9HD36 194 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF221Q9UK13 617 aa12.06□□□□□ -0.48
PTPRN2-202ENST00000389416 PRAMEF4O60810 478 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC1A3P43003 542 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 TPTEP56180 551 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 ATAD3CQ5T2N8 411 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 PRAMEF9Q5VWM5 478 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 DHRS4L2Q6PKH6 230 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 C5orf46Q6UWT4 87 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 ELP5Q8TE02 316 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 EMC6Q9BV81 110 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 VN1R1Q9GZP7 353 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 TPOP07202 933 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 WNT3P56703 355 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 RNF4P78317 190 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 SF3A2Q15428 464 aaKnown RBP12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 KDM4DQ6B0I6 523 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 LRRN1Q6UXK5 716 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 ENTHD1Q8IYW4 607 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 NEDD4LQ96PU5 975 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 NUDT9Q9BW91 350 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 SLC38A1Q9H2H9 487 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 ERVK13-1Q9NX77 482 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 KLHL13Q9P2N7 655 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 ACACAQ13085 2346 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 RBBP9O75884 186 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 MSX1P28360 303 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 CD97P48960 835 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 RGS6P49758 472 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 ZXDAP98168 799 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF704Q6ZNC4 412 aaPredicted RBP12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 OR5J2Q8NH18 312 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 DUSP15Q9H1R2 295 aaPredicted RBP12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 ANKRD19PQ9H560 264 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 ZNF385DQ9H6B1 395 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 CHRNA9Q9UGM1 479 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 YARS2Q9Y2Z4 477 aaKnown RBP12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 A0A1B0GTQ1 180 aa12.05□□□□□ -0.48
PTPRN2-202ENST00000389416 A0A1W2PNR3 127 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms