RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 TMEM72A0PK05 275 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 J3QRE1 110 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 NPIPB7O75200 414 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 PRKCAP17252 672 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 UQCRC1P31930 480 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 TGFBR1P36897 503 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 HTR3AP46098 478 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 RPS7P62081 194 aaKnown RBP16.04■□□□□ 0.16
CTTN-203ENST00000376561 ERVK-25P63136 954 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 TMED1Q13445 227 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 ALG10Q5BKT4 473 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 TMEM164Q5U3C3 297 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 PPP1R32Q7Z5V6 425 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 LHFPL3Q86UP9 236 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 FAM98AQ8NCA5 519 aaKnown RBP16.04■□□□□ 0.16
CTTN-203ENST00000376561 SECISBP2Q96T21 854 aaKnown RBP16.04■□□□□ 0.16
CTTN-203ENST00000376561 ZNF649Q9BS31 505 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 PPP4R1LQ9P1A2 415 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 FARSAQ9Y285 508 aaKnown RBP16.04■□□□□ 0.16
CTTN-203ENST00000376561 HRH3Q9Y5N1 445 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 WIF1Q9Y5W5 379 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 OTOGLQ3ZCN5 2332 aa16.04■□□□□ 0.16
CTTN-203ENST00000376561 IDH3BO43837 385 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 BGLAPP02818 100 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 TSPAN19P0C672 248 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 OTX2P32243 289 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 SLC16A1P53985 500 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.03■□□□□ 0.16
CTTN-203ENST00000376561 TRIP6Q15654 476 aaKnown RBP16.03■□□□□ 0.16
CTTN-203ENST00000376561 NANOGNBQ7Z5D8 188 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 PTDSS2Q9BVG9 487 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 JAM3Q9BX67 310 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 SDHAF3Q9NRP4 125 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 YARS2Q9Y2Z4 477 aaKnown RBP16.03■□□□□ 0.16
CTTN-203ENST00000376561 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 A8MVM7 634 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 HIST1H2ABP04908 130 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 GYPBP06028 91 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 MSX1P28360 303 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 CASP3P42574 277 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 LIMK1P53667 647 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 RPL18Q07020 188 aaKnown RBP16.03■□□□□ 0.16
CTTN-203ENST00000376561 SSPNQ14714 243 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 ARSKQ6UWY0 536 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 HIST3H2AQ7L7L0 130 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 PIP4P1Q86T03 277 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 HIST1H2ACQ93077 130 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 DNAJA3Q96EY1 480 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 NPAS1Q99742 590 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 ERVK13-1Q9NX77 482 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 NCDNQ9UBB6 729 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 CHCHD2Q9Y6H1 151 aaPredicted RBP16.03■□□□□ 0.16
CTTN-203ENST00000376561 CPAMD8Q8IZJ3 1885 aa16.03■□□□□ 0.16
CTTN-203ENST00000376561 IGLV3-32A0A0A0MS00 114 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 LOC100506127A0A0U1RQW1 187 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 FOXD2O60548 495 aaPredicted RBP16.02■□□□□ 0.16
CTTN-203ENST00000376561 CD14P08571 375 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 TIMM50Q3ZCQ8 353 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 FAM69AQ5T7M9 428 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 OPN5Q6U736 354 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 FAM122BQ7Z309 247 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 ZNF485Q8NCK3 441 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 NPEPL1Q8NDH3 523 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 OR9Q1Q8NGQ5 310 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 DYNC2LI1Q8TCX1 351 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 STK35Q8TDR2 534 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 GATAD2BQ8WXI9 593 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 RASD2Q96D21 266 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 ZHX1-C8orf76Q96EF9 292 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 NMNAT3Q96T66 252 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 CHCHD6Q9BRQ6 235 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 VDAC3Q9Y277 283 aa16.02■□□□□ 0.16
CTTN-203ENST00000376561 KNTC1P50748 2209 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 MASP2O00187 686 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 TP53I11O14683 189 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 MT-ATP6P00846 226 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 F13BP05160 661 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 APEHP13798 732 aaKnown RBP16.02■□□□□ 0.15
CTTN-203ENST00000376561 CD79BP40259 229 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 DLX5P56178 289 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 CTXN1P60606 82 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 RPS15P62841 145 aaKnown RBP16.02■□□□□ 0.15
CTTN-203ENST00000376561 SOWAHCQ53LP3 525 aaPredicted RBP16.02■□□□□ 0.15
CTTN-203ENST00000376561 C1orf140Q5VVS0 124 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 IL20RBQ6UXL0 311 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 TBC1D15Q8TC07 691 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 TM9SF4Q92544 642 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 Q96M85 177 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 DDOQ99489 341 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 CDCP1Q9H5V8 836 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 HAO2Q9NYQ3 351 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 SLC6A5Q9Y345 797 aa16.02■□□□□ 0.15
CTTN-203ENST00000376561 TEX13CA0A0J9YWL9 993 aa16.01■□□□□ 0.15
CTTN-203ENST00000376561 C12orf71A8MTZ7 269 aa16.01■□□□□ 0.15
CTTN-203ENST00000376561 LRP3O75074 770 aa16.01■□□□□ 0.15
CTTN-203ENST00000376561 CDK4P11802 303 aa16.01■□□□□ 0.15
CTTN-203ENST00000376561 TGM1P22735 817 aa16.01■□□□□ 0.15
CTTN-203ENST00000376561 TCF15Q12870 199 aa16.01■□□□□ 0.15
CTTN-203ENST00000376561 C5orf46Q6UWT4 87 aa16.01■□□□□ 0.15
CTTN-203ENST00000376561 MAMDC2Q7Z304 686 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms