RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 DEPDC4Q8N2C3 294 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 ATP6V1C2Q8NEY4 427 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 OR2T33Q8NG76 320 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 OR13C2Q8NGS9 318 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 OR51A7Q8NH64 312 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 CNBD2Q96M20 576 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 MUS81Q96NY9 551 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 MOGAT1Q96PD6 335 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 UBL7Q96S82 380 aaPredicted RBP11.1□□□□□ -0.63
TUBE1-202ENST00000368662 ASPNQ9BXN1 380 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 SLC25A19Q9HC21 320 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 TUBD1Q9UJT1 453 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 TRAPPC4Q9Y296 219 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 HIF3AQ9Y2N7 669 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 TRAV27A0A087WT01 109 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 FAM166BA8MTA8 275 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 GNAO1P09471 354 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 ZNF24P17028 368 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 RFC3P40938 356 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 GFRA1P56159 465 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 FOXK1P85037 733 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 SLC10A1Q14973 349 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 INAQ16352 499 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 TMEM176BQ3YBM2 270 aaPredicted RBP11.09□□□□□ -0.63
TUBE1-202ENST00000368662 WIPI1Q5MNZ9 446 aaPredicted RBP11.09□□□□□ -0.63
TUBE1-202ENST00000368662 C1QL3Q5VWW1 255 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 SLX4IPQ5VYV7 408 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 SLC6A19Q695T7 634 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 CASP12Q6UXS9 341 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 SCAIQ8N9R8 606 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 KDF1Q8NAX2 398 aaPredicted RBP11.09□□□□□ -0.63
TUBE1-202ENST00000368662 SLC25A36Q96CQ1 311 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 ARL5BQ96KC2 179 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 PLA2G12AQ9BZM1 189 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 ALKBH4Q9NXW9 302 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 BAIAP2Q9UQB8 552 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 B3GNT3Q9Y2A9 372 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 MPDZO75970 2070 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 LIPT2A6NK58 231 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 FTCDNL1E5RQL4 147 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 LRRN3E7EW58 273 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 MPZL2O60487 215 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 FZD7O75084 574 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 TSPAN19P0C672 248 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 SLC6A6P31641 620 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 CDK5Q00535 292 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 LTBQ06643 244 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 MYBPHQ13203 477 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 GINS1Q14691 196 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 SGCBQ16585 318 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 RPUSD3Q6P087 351 aaKnown RBP11.09□□□□□ -0.63
TUBE1-202ENST00000368662 THAP5Q7Z6K1 395 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 LRRC17Q8N6Y2 441 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 OR5J2Q8NH18 312 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 MIB2Q96AX9 1013 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 SAMD8Q96LT4 415 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 OR5B2Q96R09 309 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 TNFRSF13CQ96RJ3 184 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 ARHGAP9Q9BRR9 750 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 TSSK6Q9BXA6 273 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 TMEM185BQ9H7F4 350 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 ZDHHC11Q9H8X9 412 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 MCCC2Q9HCC0 563 aa11.09□□□□□ -0.63
TUBE1-202ENST00000368662 BLOC1S5-TXNDC5H3BN57 136 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 TFECO14948 347 aaPredicted RBP11.08□□□□□ -0.64
TUBE1-202ENST00000368662 PMS2P2O95744 297 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 CLIC3O95833 236 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 PDGFAP04085 211 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 IGFBP1P08833 259 aaPredicted RBP11.08□□□□□ -0.64
TUBE1-202ENST00000368662 POU3F2P20265 443 aaPredicted RBP11.08□□□□□ -0.64
TUBE1-202ENST00000368662 GRPRP30550 384 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 SFTPDP35247 375 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 FXYD6P3P58550 94 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 CSNK2A1P68400 391 aaPredicted RBP11.08□□□□□ -0.64
TUBE1-202ENST00000368662 FHL1Q13642 323 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 PDK3Q15120 406 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 OR7A5Q15622 319 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 TMPPEQ6ZT21 453 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 ESPNLQ6ZVH7 1005 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 OR8D4Q8NGM9 314 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 FAM81AQ8TBF8 368 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 TRUB1Q8WWH5 349 aaKnown RBP11.08□□□□□ -0.64
TUBE1-202ENST00000368662 SLC39A7Q92504 469 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 KLHL15Q96M94 604 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 SLC38A2Q96QD8 506 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 GPX7Q96SL4 187 aaPredicted RBP11.08□□□□□ -0.64
TUBE1-202ENST00000368662 IMPAD1Q9NX62 359 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 MRPL39Q9NYK5 338 aaKnown RBP11.08□□□□□ -0.64
TUBE1-202ENST00000368662 SULT2B1O00204 365 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 DNPH1O43598 174 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 EIF1BO60739 113 aaKnown RBP11.08□□□□□ -0.64
TUBE1-202ENST00000368662 OR6A2O95222 327 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 HMGN1P05114 100 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 UQCRC1P31930 480 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 SLC35A1P78382 337 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 IL5RAQ01344 420 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 ALG10Q5BKT4 473 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 CLEC12AQ5QGZ9 265 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 PDSS1Q5T2R2 415 aa11.08□□□□□ -0.64
TUBE1-202ENST00000368662 C12orf73Q69YU5 71 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms