RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 RAB27BO00194 218 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 P2RY10O00398 339 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 GABRPO00591 440 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 RRP8O43159 456 aaKnown RBP11.95□□□□□ -0.5
PTPRK-207ENST00000368226 SLCO2B1O94956 709 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 ACP2P11117 423 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 ENPP1P22413 925 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 EFNA3P52797 238 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 FGL1Q08830 312 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 BEX5Q5H9J7 111 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 PM20D2Q8IYS1 436 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 UTP4Q969X6 686 aaKnown RBP11.95□□□□□ -0.5
PTPRK-207ENST00000368226 ZNF597Q96LX8 424 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 ARRDC1-AS1Q9H2J1 176 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 COQ3Q9NZJ6 369 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 MYO18AQ92614 2054 aaKnown RBP11.95□□□□□ -0.5
PTPRK-207ENST00000368226 CACNA1SQ13698 1873 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 A0A1B0GWA3 101 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 A0A1B0GX78 115 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 PRAMEF27A3QJZ7 478 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 TTLL8A6PVC2 850 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 B8ZZF3 427 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 PLPP1O14494 284 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 SCGB2A1O75556 95 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 OR7C1O76099 320 aaPredicted RBP11.95□□□□□ -0.5
PTPRK-207ENST00000368226 AKAIN1P0CW23 69 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 ITGAMP11215 1152 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 GM2AP17900 193 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 ATP1B3P54709 279 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 IKZF1Q13422 519 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 KRBOX4Q5JUW0 171 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 AKR1C8PQ5T2L2 129 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 PRAMEF9Q5VWM5 478 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 SLC22A10Q63ZE4 541 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 ABHD17CQ6PCB6 329 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 YRDCQ86U90 279 aaKnown RBP11.95□□□□□ -0.5
PTPRK-207ENST00000368226 ALG12Q9BV10 488 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 BABAM2Q9NXR7 383 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 EHFQ9NZC4 300 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 TP53TG5Q9Y2B4 290 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 WIF1Q9Y5W5 379 aa11.95□□□□□ -0.5
PTPRK-207ENST00000368226 TCRBV5S1A1TA0A578 114 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 METTL15A6NJ78 407 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 CD300LBA8K4G0 201 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 F5H5P2 479 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 ALDOBP05062 364 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 MTCP1P56278 107 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 RPS25P62851 125 aaKnown RBP11.94□□□□□ -0.5
PTPRK-207ENST00000368226 ZNF91Q05481 1191 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 DESI1Q6ICB0 168 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 RBM45Q8IUH3 476 aaKnown RBP11.94□□□□□ -0.5
PTPRK-207ENST00000368226 PPP1R35Q8TAP8 253 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 FER1L6-AS2Q96M78 137 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 ZNF578Q96N58 590 aaPredicted RBP11.94□□□□□ -0.5
PTPRK-207ENST00000368226 NME7Q9Y5B8 376 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 OR5K3A6NET4 321 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 SEC14L2O76054 403 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 AKR7A3O95154 331 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 GAAP10253 952 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 RFC3P40938 356 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 HTR2BP41595 481 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 RRADP55042 308 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 PYCR3Q53H96 274 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 SLC48A1Q6P1K1 146 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 PSMF1Q92530 271 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 FAM210AQ96ND0 272 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 NAA50Q9GZZ1 169 aaKnown RBP11.94□□□□□ -0.5
PTPRK-207ENST00000368226 EMC9Q9Y3B6 208 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 HOXB5P09067 269 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 SNRPBP14678 240 aaKnown RBP11.94□□□□□ -0.5
PTPRK-207ENST00000368226 MSR1P21757 451 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 ZNF136P52737 540 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 PCBD1P61457 104 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 SLC9A3R2Q15599 337 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 BCL7AQ4VC05 210 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 OR2T35Q8NGX2 323 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 MMP17Q9ULZ9 603 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 NTNG1Q9Y2I2 539 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 ATG12O94817 140 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 RPA2P15927 270 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 DLSTP36957 453 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 OPRD1P41143 372 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 USF2Q15853 346 aaPredicted RBP11.94□□□□□ -0.5
PTPRK-207ENST00000368226 H1FXQ92522 213 aaKnown RBP11.94□□□□□ -0.5
PTPRK-207ENST00000368226 CNOT9Q92600 299 aaKnown RBP11.94□□□□□ -0.5
PTPRK-207ENST00000368226 GON4LQ3T8J9 2241 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 CENPBD1B2RD01 187 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 SC5DO75845 299 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 GIFP27352 417 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 IL2RGP31785 369 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 TSPAN31Q12999 210 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 SPCS2Q15005 226 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 OR8B8Q15620 311 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 GDF7Q7Z4P5 450 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 ZNF587Q96SQ5 575 aaPredicted RBP11.94□□□□□ -0.5
PTPRK-207ENST00000368226 NIPSNAP1Q9BPW8 284 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 HS3ST3A1Q9Y663 406 aa11.94□□□□□ -0.5
PTPRK-207ENST00000368226 CDHR4A6H8M9 788 aa11.93□□□□□ -0.5
PTPRK-207ENST00000368226 KCNK5O95279 499 aa11.93□□□□□ -0.5
PTPRK-207ENST00000368226 SLC2A1P11166 492 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms