RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 CECR9P0C854 216 aa12□□□□□ -0.49
VPS29-201ENST00000360579 UQCRBP14927 111 aa12□□□□□ -0.49
VPS29-201ENST00000360579 KCNJ10P78508 379 aa12□□□□□ -0.49
VPS29-201ENST00000360579 TYW3Q6IPR3 259 aaKnown RBP12□□□□□ -0.49
VPS29-201ENST00000360579 USP43Q70EL4 1123 aa12□□□□□ -0.49
VPS29-201ENST00000360579 C10orf107Q8IVU9 208 aa12□□□□□ -0.49
VPS29-201ENST00000360579 RIMKLAQ8IXN7 391 aa12□□□□□ -0.49
VPS29-201ENST00000360579 KRTCAP2Q8N6L1 136 aa12□□□□□ -0.49
VPS29-201ENST00000360579 FNDC5Q8NAU1 212 aa12□□□□□ -0.49
VPS29-201ENST00000360579 JMJD8Q96S16 334 aa12□□□□□ -0.49
VPS29-201ENST00000360579 DOK1Q99704 481 aa12□□□□□ -0.49
VPS29-201ENST00000360579 RBM4Q9BWF3 364 aaKnown RBP12□□□□□ -0.49
VPS29-201ENST00000360579 GATA5Q9BWX5 397 aaPredicted RBP12□□□□□ -0.49
VPS29-201ENST00000360579 OSGIN1Q9UJX0 560 aa12□□□□□ -0.49
VPS29-201ENST00000360579 GRIP1Q9Y3R0 1128 aa12□□□□□ -0.49
VPS29-201ENST00000360579 TMEM72A0PK05 275 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 COPEO14579 308 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 BCAS1O75363 584 aaPredicted RBP11.99□□□□□ -0.49
VPS29-201ENST00000360579 VAMP5O95183 116 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 LGI1O95970 557 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 IGKV3-15P01624 115 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 LIMS1P48059 325 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 SH3BGRP55822 239 aaPredicted RBP11.99□□□□□ -0.49
VPS29-201ENST00000360579 HPCAP84074 193 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 POU3F1Q03052 451 aaPredicted RBP11.99□□□□□ -0.49
VPS29-201ENST00000360579 CCNIQ14094 377 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 TRIP10Q15642 601 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 ADRM1Q16186 407 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 UGT3A2Q3SY77 523 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 XKR7Q5GH72 579 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 IL23RQ5VWK5 629 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 OLIG3Q7RTU3 272 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 SPATA21Q7Z572 469 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 GPAT4Q86UL3 456 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 CMIPQ8IY22 773 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 SVOPLQ8N434 492 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 ZIC4Q8N9L1 334 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 MNS1Q8NEH6 495 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 XAGE5Q8WWM1 108 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 BCL2L2Q92843 193 aaPredicted RBP11.99□□□□□ -0.49
VPS29-201ENST00000360579 TMEM186Q96B77 213 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 ROPN1LQ96C74 230 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 ZNF385AQ96PM9 386 aaKnown RBP11.99□□□□□ -0.49
VPS29-201ENST00000360579 C1orf50Q9BV19 199 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 OR51I1Q9H343 314 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 PRDM4Q9UKN5 801 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 PCDHB10Q9UN67 800 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 SPEF1Q9Y4P9 236 aa11.99□□□□□ -0.49
VPS29-201ENST00000360579 DYSFO75923 2080 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 AQP7P3A6NL99 342 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 TMEM233B4DJY2 109 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 FAAHO00519 579 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 OR12D1P0DN82 309 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 CREB1P16220 341 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 TACR3P29371 465 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 CALCRP30988 508 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 THBS4P35443 961 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 HILS1P60008 231 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 IL1RL1Q01638 556 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 GNA13Q14344 377 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 C6orf136Q5SQH8 315 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 TMEM225Q6GV28 225 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 FRRS1Q6ZNA5 592 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 TMEM99Q8N816 258 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 NOA1Q8NC60 698 aaKnown RBP11.98□□□□□ -0.49
VPS29-201ENST00000360579 IL17RDQ8NFM7 739 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 CKAP2Q8WWK9 683 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 HIF1ANQ9NWT6 349 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 GIMAP2Q9UG22 337 aa11.98□□□□□ -0.49
VPS29-201ENST00000360579 LIPT2A6NK58 231 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 RNASET2O00584 256 aaKnown RBP11.97□□□□□ -0.49
VPS29-201ENST00000360579 NPHS1O60500 1241 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 SKAP2O75563 359 aaPredicted RBP11.97□□□□□ -0.49
VPS29-201ENST00000360579 AKR7A3O95154 331 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 TFP02787 698 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 MSMBP08118 114 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 CBR1P16152 277 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 ARR3P36575 388 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 HGFACQ04756 655 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 MAD2L1Q13257 205 aaPredicted RBP11.97□□□□□ -0.49
VPS29-201ENST00000360579 CEACAM7Q14002 265 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 PCLAFQ15004 111 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 OR7A5Q15622 319 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 GSTA3Q16772 222 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 PGS1Q32NB8 556 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 PEG10Q86TG7 708 aaKnown RBP11.97□□□□□ -0.49
VPS29-201ENST00000360579 CLEC4FQ8N1N0 589 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 ZCCHC24Q8N2G6 241 aaKnown RBP11.97□□□□□ -0.49
VPS29-201ENST00000360579 OR4A15Q8NGL6 344 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 OR51F2Q8NH61 342 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 ALKBH3Q96Q83 286 aaPredicted RBP11.97□□□□□ -0.49
VPS29-201ENST00000360579 TAPBPLQ9BX59 468 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 LINC00470Q9BZP3 86 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 USP22Q9UPT9 525 aa11.97□□□□□ -0.49
VPS29-201ENST00000360579 PKD1L1Q8TDX9 2849 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 A0A096LPE4 126 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 A0A1W2PPZ6 126 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 TMEM129A0AVI4 362 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 SH3PXD2BA1X283 911 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 ZC3H12DA2A288 527 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms