RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ZNF84P51523 738 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 SF3B4Q15427 424 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■■□□□ 12.7
SCAF1-201ENST00000360565 KIAA0895LQ68EN5 471 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 ZNF704Q6ZNC4 412 aaPredicted RBP15.11■□□□□ 0.01
SCAF1-201ENST00000360565 DGLUCYQ7Z3D6 616 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 KCTD20Q7Z5Y7 419 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 UEVLDQ8IX04 471 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 GALNT11Q8NCW6 608 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 OR4M2Q8NGB6 313 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 RSC1A1Q92681 617 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 DOK1Q99704 481 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 CXorf51AA0A1B0GTR3 108 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 GOSR2O14653 212 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 GLP1RP43220 463 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 CBFBQ13951 182 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 AWAT2Q6E213 333 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 SLC16A12Q6ZSM3 486 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 BBS1Q8NFJ9 593 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 FYTTD1Q96QD9 318 aaKnown RBP15.11■□□□□ 0.01
SCAF1-201ENST00000360565 OR2M2Q96R28 347 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 ZNF587Q96SQ5 575 aaPredicted RBP15.11■□□□□ 0.01
SCAF1-201ENST00000360565 COQ3Q9NZJ6 369 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 BRWD3Q6RI45 1802 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 ARRDC5A6NEK1 342 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 CTNSO60931 367 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 UBL3O95164 117 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 MPIG6BO95866 241 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 LSSP48449 732 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 PPP2CBP62714 309 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 PPP2CAP67775 309 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 LTBQ06643 244 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 OR56B4Q8NH76 319 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 DDIT4LQ96D03 193 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 TMPRSS11EQ9UL52 423 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 CD34P28906 385 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 AGTR1P30556 359 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 POU3F4P49335 361 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 PLGLB1Q02325 96 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 SPOCK1Q08629 439 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 NLGN4YQ8NFZ3 816 aaPredicted RBP15.11■□□□□ 0.01
SCAF1-201ENST00000360565 NPRL2Q8WTW4 380 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 KIAA1143Q96AT1 154 aaPredicted RBP15.11■□□□□ 0.01
SCAF1-201ENST00000360565 RASD2Q96D21 266 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 CPNE2Q96FN4 548 aaPredicted RBP15.11■□□□□ 0.01
SCAF1-201ENST00000360565 SENP5Q96HI0 755 aaPredicted RBP15.11■□□□□ 0.01
SCAF1-201ENST00000360565 NRIP3Q9NQ35 241 aa15.11■□□□□ 0.01
SCAF1-201ENST00000360565 ZNF736B4DX44 427 aaPredicted RBP15.1■□□□□ 0.01
SCAF1-201ENST00000360565 SEC14L5O43304 696 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 PRAMEF4O60810 478 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 RAB40ALP0C0E4 278 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 CPEP16870 476 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 PRAMEF9Q5VWM5 478 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 GIMAP1Q8WWP7 306 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 RAB40AQ8WXH6 277 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 OR5B2Q96R09 309 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 SEMA6CQ9H3T2 930 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 FTSJ1Q9UET6 329 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 RPH3AQ9Y2J0 694 aaPredicted RBP15.1■□□□□ 0.01
SCAF1-201ENST00000360565 SLC6A5Q9Y345 797 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 TRBV5-3A0A0A0MS03 114 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 FARS2O95363 451 aaKnown RBP15.1■□□□□ 0.01
SCAF1-201ENST00000360565 CD14P08571 375 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 FABP5Q01469 135 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 ACY1Q03154 408 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 FCN2Q15485 313 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 ARHGAP11BQ3KRB8 267 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 AGBL4Q5VU57 503 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 AMER3Q8N944 861 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 SLC38A1Q9H2H9 487 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 LYRM4Q9HD34 91 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 KCNE3Q9Y6H6 103 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 TNFRSF10CO14798 259 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 FABP7O15540 132 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 LIPCP11150 499 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 PSMB1P20618 241 aaKnown RBP15.1■□□□□ 0.01
SCAF1-201ENST00000360565 HLA-DMAP28067 261 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 SOX18P35713 384 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 CAPZA1P52907 286 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 KIAA1024LP59773 190 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 HERV-K104P61576 105 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 VAMP2P63027 116 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 POU3F1Q03052 451 aaPredicted RBP15.1■□□□□ 0.01
SCAF1-201ENST00000360565 PDZD9Q8IXQ8 264 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 DUSP19Q8WTR2 217 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 NRSN2Q9GZP1 204 aa15.1■□□□□ 0.01
SCAF1-201ENST00000360565 METTL17Q9H7H0 456 aaPredicted RBP15.1■□□□□ 0.01
SCAF1-201ENST00000360565 TMEM269A0A1B0GVZ9 245 aa15.09■□□□□ 0.01
SCAF1-201ENST00000360565 AGAP14A8MT82 685 aa15.09■□□□□ 0.01
SCAF1-201ENST00000360565 THBS1P07996 1170 aa15.09■□□□□ 0.01
SCAF1-201ENST00000360565 CSF1P09603 554 aa15.09■□□□□ 0.01
SCAF1-201ENST00000360565 TRHRP34981 398 aaPredicted RBP15.09■□□□□ 0.01
SCAF1-201ENST00000360565 GPR50Q13585 617 aa15.09■□□□□ 0.01
SCAF1-201ENST00000360565 HACD4Q5VWC8 232 aa15.09■□□□□ 0.01
SCAF1-201ENST00000360565 GALNT6Q8NCL4 622 aa15.09■□□□□ 0.01
SCAF1-201ENST00000360565 ELF4Q99607 663 aaPredicted RBP15.09■□□□□ 0.01
SCAF1-201ENST00000360565 TEX46H3BTG2 121 aa15.09■□□□□ 0.01
SCAF1-201ENST00000360565 SLC43A1O75387 559 aa15.09■□□□□ 0.01
SCAF1-201ENST00000360565 CSNK1EP49674 416 aaKnown RBP15.09■□□□□ 0.01
SCAF1-201ENST00000360565 TDGQ13569 410 aa15.09■□□□□ 0.01
SCAF1-201ENST00000360565 CFAP77Q6ZQR2 320 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms