RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZNF385DQ9H6B1 395 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 LIN28AQ9H9Z2 209 aaKnown RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 A0A1W2PS29 197 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CDHR4A6H8M9 788 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TMEM189-UBE2V1I3L0A0 370 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF264O43296 627 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TUSC2O75896 110 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 GPR75O95800 540 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 GSTP1P09211 210 aaKnown RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 HIST1H1TP22492 207 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 AQP2P41181 271 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 RAD52P43351 418 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 VEGFCP49767 419 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 RACK1P63244 317 aaKnown RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF813Q6ZN06 617 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TMEM135Q86UB9 458 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF679Q8IYX0 411 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SLC15A4Q8N697 577 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 BEST4Q8NFU0 473 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 OR51L1Q8NGJ5 315 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CMTM2Q8TAZ6 248 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CD200R1Q8TD46 325 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 AGAP14A8MT82 685 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TNFSF12O43508 249 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 GLCEO94923 617 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 RETP07949 1114 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CD27P26842 260 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SLC6A11P48066 632 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CXCR4P61073 352 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 HBG1P69891 147 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 HBG2P69892 147 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 USP51Q70EK9 711 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 GDPD3Q7L5L3 318 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SCML4Q8N228 414 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SLAMF9Q96A28 289 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF583Q96ND8 569 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TRAF4Q9BUZ4 470 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 FAM234AQ9H0X4 552 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 EHFQ9NZC4 300 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 PCDHGA7Q9Y5G6 932 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 MAST2Q6P0Q8 1798 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SLC22A5O76082 557 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 STSP08842 583 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TAS2R19P59542 299 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 DEFB103AP81534 67 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 FAM74A1Q5RGS3 127 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 GARNL3Q5VVW2 1013 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 MFSD6LQ8IWD5 586 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 MRPL43Q8N983 215 aaKnown RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 GDPD1Q8N9F7 314 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SIMC1Q8NDZ2 872 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 OR7G1Q8NGA0 311 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 RHOXF1Q8NHV9 184 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZDHHC16Q969W1 377 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 MRPL38Q96DV4 380 aaKnown RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF486Q96H40 463 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SLC29A1Q99808 456 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 PAAF1Q9BRP4 392 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 DPCDQ9BVM2 203 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 RTL8AQ9BWD3 113 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SAMD10Q9BYL1 202 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 XYLT2Q9H1B5 865 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 LIN7BQ9HAP6 207 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CA5BQ9Y2D0 317 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SSUH2Q9Y2M2 353 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 C7orf72A4D263 438 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 METTL15A6NJ78 407 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 OPN1LWP04000 364 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SUB1P53999 127 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SSX2Q16385 188 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 OR52B6Q8NGF0 335 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 NEIL2Q969S2 332 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 OR51E2Q9H255 320 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 IL26Q9NPH9 171 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CD300AQ9UGN4 299 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 FAM96BQ9Y3D0 163 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 BAZ2BQ9UIF8 2168 aaKnown RBP5.15□□□□□ -1.58
PTPRD-202ENST00000356435 C20orf202A1L168 122 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 PRAMEF27A3QJZ7 478 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 NOTOA8MTQ0 251 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 BMI1P35226 326 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 GNB2P62879 340 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 SPOCK1Q08629 439 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 IER5LQ5T953 404 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 PRAMEF9Q5VWM5 478 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 NKAIN2Q5VXU1 208 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 TDHQ8IZJ6 230 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 L3MBTL4Q8NA19 623 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 CHDHQ8NE62 594 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-202ENST00000356435 TTC9Q92623 222 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 TMIGD2Q96BF3 282 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 APIPQ96GX9 242 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 ZBED3Q96IU2 234 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-202ENST00000356435 THOC3Q96J01 351 aaKnown RBP5.15□□□□□ -1.58
PTPRD-202ENST00000356435 LUZP4Q9P127 313 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 TRAV27A0A087WT01 109 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 A0A1B0GX78 115 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 G3V2L1 256 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 H0YGG7 62 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms