RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 NMNAT2Q9BZQ4 307 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 SLC19A3Q9BZV2 496 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 DPAGT1Q9H3H5 408 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 PRTFDC1Q9NRG1 225 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 SPATA2Q9UM82 520 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 OR6C68A6NDL8 312 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 ANKRD61A6NGH8 418 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 CLDN4O14493 209 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 ARHGEF9O43307 516 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 SRPX2O60687 465 aaPredicted RBP13.33□□□□□ -0.28
TDP2-201ENST00000341060 ALX3O95076 343 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 THEGLP0DJG4 465 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 SPI1P17947 270 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 BTG2P78543 158 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 FUT7Q11130 342 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 MRPL28Q13084 256 aaKnown RBP13.33□□□□□ -0.28
TDP2-201ENST00000341060 LYPD4Q6UWN0 246 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 BAIAP2L2Q6UXY1 529 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 SMRP1Q8NCR6 262 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 C3orf49Q96BT1 292 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 MRPL48Q96GC5 212 aaKnown RBP13.33□□□□□ -0.28
TDP2-201ENST00000341060 GPX7Q96SL4 187 aaPredicted RBP13.33□□□□□ -0.28
TDP2-201ENST00000341060 SLX1AQ9BQ83 275 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 YIPF2Q9BWQ6 316 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 OR10A5Q9H207 317 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 C8orf33Q9H7E9 229 aaPredicted RBP13.33□□□□□ -0.28
TDP2-201ENST00000341060 BRD7Q9NPI1 651 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 NCDNQ9UBB6 729 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 CLEC4AQ9UMR7 237 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 COPS3Q9UNS2 423 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 ERVK-19Q9WJR5 959 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 OR10H1Q9Y4A9 318 aa13.33□□□□□ -0.28
TDP2-201ENST00000341060 A0A0B4J203 849 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 ZNF749O43361 778 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 SELENOFO60613 162 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 OR7A10O76100 309 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 NSA2O95478 260 aaKnown RBP13.32□□□□□ -0.28
TDP2-201ENST00000341060 EDNRAP25101 427 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 CCR5P51681 352 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 PRPS1P60891 318 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 MAT1AQ00266 395 aaKnown RBP13.32□□□□□ -0.28
TDP2-201ENST00000341060 GALK2Q01415 458 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 HSF2Q03933 536 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 C1orf61Q13536 156 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.32□□□□□ -0.28
TDP2-201ENST00000341060 KIAA0895LQ68EN5 471 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 THOC7Q6I9Y2 204 aaKnown RBP13.32□□□□□ -0.28
TDP2-201ENST00000341060 ZPLD1Q8TCW7 415 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 PHYHIPQ92561 330 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 HYLS1Q96M11 299 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 PDCD1LG2Q9BQ51 273 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 GHITMQ9H3K2 345 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 CCDC86Q9H6F5 360 aaKnown RBP13.32□□□□□ -0.28
TDP2-201ENST00000341060 COPZ2Q9P299 210 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 TEKT2Q9UIF3 430 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 NUBP2Q9Y5Y2 271 aa13.32□□□□□ -0.28
TDP2-201ENST00000341060 TRAV6A0A075B6T7 132 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 B4DGG1 531 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 ZNF879B4DU55 563 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 GPRIN2O60269 458 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 TCRBP04435 133 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 CD3GP09693 182 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 PGDP52209 483 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 DGCR2P98153 550 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 IL10RAQ13651 578 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 ERV3-1Q14264 604 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 GXYLT1Q4G148 440 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 HSD17B12Q53GQ0 312 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 LAMTOR1Q6IAA8 161 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 UNQ9370/PRO34162Q6UXP9 181 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 FAM71CQ8NEG0 241 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 OR6C4Q8NGE1 309 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 OR6K6Q8NGW6 343 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 RPS4Y2Q8TD47 263 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 RASD2Q96D21 266 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 HSPA12BQ96MM6 686 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 CMTM3Q96MX0 182 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 NDEL1Q9GZM8 345 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 MED28Q9H204 178 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 CD207Q9UJ71 328 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 PCDH15Q96QU1 1955 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 COL5A1P20908 1838 aaPredicted RBP13.31□□□□□ -0.28
TDP2-201ENST00000341060 SMLR1H3BR10 107 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 IMPA2O14732 288 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 GSTZ1O43708 216 aaPredicted RBP13.31□□□□□ -0.28
TDP2-201ENST00000341060 OR2B3O76000 313 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 IGF2P01344 180 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 IGLV3-19P01714 112 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 PRKCAP17252 672 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 MAOAP21397 527 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 CCINQ13939 588 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 BTBD16Q32M84 506 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 KLHL26Q53HC5 615 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 UBE2NLQ5JXB2 153 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 ZNF440Q8IYI8 595 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 GHDCQ8N2G8 530 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 ZNF615Q8N8J6 731 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 DEDD2Q8WXF8 326 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 ZFP3Q96NJ6 502 aa13.31□□□□□ -0.28
TDP2-201ENST00000341060 CCNL2Q96S94 520 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms