RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ZNF559Q9BR84 538 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF225Q9UK10 706 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF705GA8MUZ8 300 aaPredicted RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 GATCO43716 136 aaKnown RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 CLEC3AO75596 197 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 KCNJ5P48544 419 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 NDUFA6P56556 154 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 KCNJ10P78508 379 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 SLC7A9P82251 487 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 SPIN3Q5JUX0 258 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 C1orf189Q5VU69 101 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 TMEM239Q8WW34 195 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ATF6BQ99941 703 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ACSS1Q9NUB1 689 aaPredicted RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 PURGQ9UJV8 347 aaKnown RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 SLC6A14Q9UN76 642 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 NAP1L6A6NFF2 107 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 CDC40O60508 579 aaKnown RBP eCLIP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 CRYBA1P05813 215 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 GPX2P18283 190 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 FPR3P25089 353 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 IMPA1P29218 277 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 PRKAR1BP31321 381 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 SOX18P35713 384 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 INSL4Q14641 139 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF674Q2M3X9 581 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 FAAP20Q6NZ36 180 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 TRIM46Q7Z4K8 759 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 OR8J2Q8NGG1 315 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 OR5W2Q8NH69 310 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF582Q96NG8 517 aaPredicted RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ADAT1Q9BUB4 502 aaKnown RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 ABI3Q9P2A4 366 aa14.94□□□□□ -0.02
NPHP3-201ENST00000337331 C14orf166Q9Y224 244 aaKnown RBP14.94□□□□□ -0.02
NPHP3-201ENST00000337331 CPEP16870 476 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 HSD17B13Q7Z5P4 300 aaPredicted RBP14.93□□□□□ -0.02
NPHP3-201ENST00000337331 MFSD8Q8NHS3 518 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 RP1P56715 2156 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 IGLV3-10A0A075B6K4 115 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 H0YIV9 168 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 TRAPPC6AO75865 159 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 HHEXQ03014 270 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 ARHGAP19Q14CB8 494 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 GXYLT1Q4G148 440 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 BAIAP2L2Q6UXY1 529 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 OR2A12Q8NGT7 310 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 SMAP2Q8WU79 429 aaPredicted RBP14.93□□□□□ -0.02
NPHP3-201ENST00000337331 ANKRD19PQ9H560 264 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 MBP02144 154 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 HIST1H1TP22492 207 aaPredicted RBP14.93□□□□□ -0.02
NPHP3-201ENST00000337331 CCNOP22674 350 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 ILKQ13418 452 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF628Q5EBL2 1059 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 ATRAIDQ6UW56 229 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 TMEM173Q86WV6 379 aaPredicted RBP14.93□□□□□ -0.02
NPHP3-201ENST00000337331 VRK1Q99986 396 aaPredicted RBP14.93□□□□□ -0.02
NPHP3-201ENST00000337331 SYT4Q9H2B2 425 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 GAREM1Q9H706 876 aa14.93□□□□□ -0.02
NPHP3-201ENST00000337331 GYPBP06028 91 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 NMBP08949 121 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 SMIM6P0DI80 62 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 PGFP49763 221 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF616Q08AN1 781 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF565Q8N9K5 539 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 BRIX1Q8TDN6 353 aaKnown RBP14.92□□□□□ -0.02
NPHP3-201ENST00000337331 FBXO17Q96EF6 278 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 PTDSS2Q9BVG9 487 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 RNF32Q9H0A6 362 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 SLC22A7Q9Y694 548 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 GPR89AB7ZAQ6 455 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 KIAA0355O15063 1070 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 HRO43593 1189 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 GPR89BP0CG08 455 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 PRR35P0CG20 571 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF888P0CJ79 500 aaPredicted RBP14.92□□□□□ -0.02
NPHP3-201ENST00000337331 PIPP12273 146 aaPredicted RBP14.92□□□□□ -0.02
NPHP3-201ENST00000337331 PGCP20142 388 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 HOXC12P31275 282 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 RBMXP38159 391 aaKnown RBP14.92□□□□□ -0.02
NPHP3-201ENST00000337331 CDK3Q00526 305 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 SGCAQ16586 387 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 CDNFQ49AH0 187 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 PIP5KL1Q5T9C9 394 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 CCDC54Q8NEL0 328 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 IER3IP1Q9Y5U9 82 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 LGI1O95970 557 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 RIDAP52758 137 aaKnown RBP14.92□□□□□ -0.02
NPHP3-201ENST00000337331 CLDN12P56749 244 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 RNASE10Q5GAN6 216 aaKnown RBP14.92□□□□□ -0.02
NPHP3-201ENST00000337331 CLEC9AQ6UXN8 241 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 VRK3Q8IV63 474 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 L3MBTL4Q8NA19 623 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 OR52E1Q8NGJ3 308 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 OR14K1Q8NGZ2 314 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 GCDHQ92947 438 aaPredicted RBP14.92□□□□□ -0.02
NPHP3-201ENST00000337331 C20orf24Q9BUV8 137 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 EGLN3Q9H6Z9 239 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 ACER3Q9NUN7 267 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 KCMF1Q9P0J7 381 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 GPR34Q9UPC5 381 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms