RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 CLDN22Q8N7P3 220 aa24.7■■□□□ 1.54
CTDNEP1-201ENST00000318988 OR52L1Q8NGH7 329 aa24.7■■□□□ 1.54
CTDNEP1-201ENST00000318988 PNPLA2Q96AD5 504 aa24.7■■□□□ 1.54
CTDNEP1-201ENST00000318988 KLHL15Q96M94 604 aa24.7■■□□□ 1.54
CTDNEP1-201ENST00000318988 EGLN3Q9H6Z9 239 aa24.7■■□□□ 1.54
CTDNEP1-201ENST00000318988 TBC1D23Q9NUY8 699 aa24.7■■□□□ 1.54
CTDNEP1-201ENST00000318988 LAMA5O15230 3695 aa24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 A0A1W2PNR3 127 aa24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 CRYABP02511 175 aaKnown RBP24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 POLR2IP36954 125 aaKnown RBP24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 OR2B6P58173 313 aa24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 LTBQ06643 244 aa24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 ANKDD1AQ495B1 522 aa24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 SMARCD3Q6STE5 483 aa24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 TNFRSF13CQ96RJ3 184 aa24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 SIGLEC7Q9Y286 467 aa24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 CORINQ9Y5Q5 1042 aa24.69■■□□□ 1.54
CTDNEP1-201ENST00000318988 LOC100130705A0A1B0GUX0 176 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 LIPT2A6NK58 231 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 BLOC1S5-TXNDC5H3BN57 136 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 SULT2B1O00204 365 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 ASAH2BP0C7U1 165 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 SHC1P29353 583 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 TPD52P55327 224 aaPredicted RBP24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 NADK2Q4G0N4 442 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 PDSS1Q5T2R2 415 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 C19orf48Q6RUI8 117 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 KIF18BQ86Y91 864 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 NEIL3Q8TAT5 605 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 TFAP2CQ92754 450 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 ABTB1Q969K4 478 aaPredicted RBP24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 ZNF570Q96NI8 536 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 TEX12Q9BXU0 123 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 GRIP2Q9C0E4 1043 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 OR52D1Q9H346 318 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 IL20Q9NYY1 176 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 TRAPPC4Q9Y296 219 aa24.68■■□□□ 1.54
CTDNEP1-201ENST00000318988 BCKDKO14874 412 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 SEC14L5O43304 696 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 PTP4A3O75365 173 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 OR6A2O95222 327 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 ACTL6AO96019 429 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 IMPDH2P12268 514 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 GRPRP30550 384 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 PRPS1P60891 318 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 CSNK2A1P68400 391 aaPredicted RBP24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 FOXK2Q01167 660 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 PMS2P3Q13401 168 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 PTGES3Q15185 160 aaKnown RBP24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 TMPPEQ6ZT21 453 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 UBQLNLQ8IYU4 475 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 OR5J2Q8NH18 312 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 SAMD8Q96LT4 415 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 TSSK6Q9BXA6 273 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 ALKBH4Q9NXW9 302 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 LUZP4Q9P127 313 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 LRRC42Q9Y546 428 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 GMPPBQ9Y5P6 360 aa24.67■■□□□ 1.54
CTDNEP1-201ENST00000318988 EIF1AYO14602 144 aaKnown RBP24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 SLC16A6O15403 523 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 NDUFB2O95178 105 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 PMS2P2O95744 297 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 IGFBP1P08833 259 aaPredicted RBP24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 STARP49675 285 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 DIO1P49895 249 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 SLC35A1P78382 337 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 ADARB1P78563 741 aaKnown RBP24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 CMPK2Q5EBM0 449 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 ESPNLQ6ZVH7 1005 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 SLC43A2Q8N370 569 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 TEX19Q8NA77 164 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 MIB2Q96AX9 1013 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 TAAR6Q96RI8 345 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 TSPAN10Q9H1Z9 355 aaPredicted RBP24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 MGAQ8IWI9 3026 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 FTCDNL1E5RQL4 147 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 TNFSF11O14788 317 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 TP53P04637 393 aaPredicted RBP24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 SFTPCP11686 197 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 EPHA2P29317 976 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 RPL4P36578 427 aaKnown RBP24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 CLEC12AQ5QGZ9 265 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 FAM180AQ6UWF9 173 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 MEIOBQ8N635 442 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 SCAIQ8N9R8 606 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 MCCC2Q9HCC0 563 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 MRPL39Q9NYK5 338 aaKnown RBP24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 LIPGQ9Y5X9 500 aa24.66■■□□□ 1.54
CTDNEP1-201ENST00000318988 NCKAP5O14513 1909 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 NPIPA5E9PKD4 350 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 M0R082 166 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 SLC6A6P31641 620 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 SMSP52788 366 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 CLDN20P56880 219 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 GINS1Q14691 196 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 SGCBQ16585 318 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 HBMQ6B0K9 141 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 SLC27A4Q6P1M0 643 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 TRILQ7L0X0 811 aa24.65■■□□□ 1.54
CTDNEP1-201ENST00000318988 ZNF417Q8TAU3 575 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms