RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TMEM163Q8TC26 289 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TRUB1Q8WWH5 349 aaKnown RBP6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TMEM234Q8WY98 164 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 GGHQ92820 318 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 RELTQ969Z4 430 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 C1GALT1C1Q96EU7 318 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SGCZQ96LD1 299 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 FER1L6-AS2Q96M78 137 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SIGLEC11Q96RL6 698 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 DUSP21Q9H596 190 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 DEPPQ9NTK1 212 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 PLCXD1Q9NUJ7 323 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 FKBP14Q9NWM8 211 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TUBA8Q9NY65 449 aaPredicted RBP6.3□□□□□ -1.4
PTCD2-201ENST00000308077 STMN3Q9NZ72 180 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ERVK-18Q9QC07 812 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF337Q9Y3M9 751 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TRAV36DV7A0A075B6V5 113 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 ANKRD33BA6NCL7 494 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 A8MVM7 634 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 MCIDASD6RGH6 385 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 TRIM3O75382 744 aaPredicted RBP6.29□□□□□ -1.4
PTCD2-201ENST00000308077 PPP1R3DO95685 299 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 PRKAR1AP10644 381 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 BMP7P18075 431 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 SPINK2P20155 84 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 CD96P40200 585 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 APOBEC1P41238 236 aaKnown RBP6.29□□□□□ -1.4
PTCD2-201ENST00000308077 RPL5P46777 297 aaKnown RBP6.29□□□□□ -1.4
PTCD2-201ENST00000308077 ALDH3B2P48448 385 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 DNASE1L1P49184 302 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF41P51814 821 aaPredicted RBP6.29□□□□□ -1.4
PTCD2-201ENST00000308077 MVKQ03426 396 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 DBPQ10586 325 aaPredicted RBP6.29□□□□□ -1.4
PTCD2-201ENST00000308077 OCLNQ16625 522 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 SYT14P1Q58G82 188 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 SLC25A30Q5SVS4 291 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 RPL13AP3Q6NVV1 102 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 AHSA2Q719I0 299 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 IGFN1Q86VF2 1251 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 SPARTQ8N0X7 666 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 LNX2Q8N448 690 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 CLEC1AQ8NC01 280 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF540Q8NDQ6 660 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 PSD4Q8NDX1 1056 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 OR52L1Q8NGH7 329 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 OR5M1Q8NGP8 315 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 MOSPD2Q8NHP6 518 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 TMEM41AQ96HV5 264 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 GNRHR2Q96P88 292 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 SIGLEC12Q96PQ1 595 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 IFT27Q9BW83 186 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 CLN6Q9NWW5 311 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 SEC14L4Q9UDX3 406 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 CHRNA9Q9UGM1 479 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 PSORS1C1Q9UIG5 152 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 BLOC1S6Q9UL45 172 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 TPRKBQ9Y3C4 175 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 PCDHGB6Q9Y5F9 930 aa6.29□□□□□ -1.4
PTCD2-201ENST00000308077 SH3D21A4FU49 640 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 HTR3EA5X5Y0 456 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 LRRC3CA6NJW4 275 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 CLCA1A8K7I4 914 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 SLC25A12O75746 678 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 NEURL1O76050 574 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 NDUFB2O95178 105 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 WDPCPO95876 746 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 MT-ND2P03891 347 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 P04436 131 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 TSPAN19P0C672 248 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 PCMT1P22061 227 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 UQCRC1P31930 480 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 GRK5P34947 590 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 AQP2P41181 271 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 SLC15A1P46059 708 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 MASP1P48740 699 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 CYB561P49447 251 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 GPR85P60893 370 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 OC90Q02509 493 aaPredicted RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 TUBA3CQ13748 450 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF362Q5T0B9 420 aaPredicted RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 SLC35F1Q5T1Q4 408 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 ABHD17BQ5VST6 288 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 C1orf140Q5VVS0 124 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 XAF1Q6GPH4 301 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 SPINK14Q6IE38 97 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 TUBA3EQ6PEY2 450 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 KCTD8Q6ZWB6 473 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 GPALPP1Q8IXQ4 340 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 GALNT16Q8N428 558 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 PIP4P2Q8N4L2 257 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 C10orf53Q8N6V4 93 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 LRRC75AQ8NAA5 344 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 BBS1Q8NFJ9 593 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 OR1J4Q8NGS1 313 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 STK35Q8TDR2 534 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 NXPE2Q96DL1 559 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 ARL5BQ96KC2 179 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 LRR1Q96L50 414 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 MRGPRX4Q96LA9 322 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms