RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 TOMM5Q8N4H5 51 aa15.02■□□□□ -0
CTCF-201ENST00000264010 NANPQ8TBE9 248 aa15.02■□□□□ -0
CTCF-201ENST00000264010 SLC7A6Q92536 515 aa15.02■□□□□ -0
CTCF-201ENST00000264010 HSPA12BQ96MM6 686 aa15.02■□□□□ -0
CTCF-201ENST00000264010 TTTY10Q9BZA0 68 aa15.02■□□□□ -0
CTCF-201ENST00000264010 EXTL2Q9UBQ6 330 aa15.02■□□□□ -0
CTCF-201ENST00000264010 SERTAD3Q9UJW9 196 aa15.02■□□□□ -0
CTCF-201ENST00000264010 GNG8Q9UK08 70 aa15.02■□□□□ -0
CTCF-201ENST00000264010 PEPDP12955 493 aa15.02■□□□□ -0
CTCF-201ENST00000264010 MAOBP27338 520 aa15.02■□□□□ -0
CTCF-201ENST00000264010 FBXW4P57775 412 aa15.02■□□□□ -0
CTCF-201ENST00000264010 FZD2Q14332 565 aa15.02■□□□□ -0
CTCF-201ENST00000264010 CEBPEQ15744 281 aa15.02■□□□□ -0
CTCF-201ENST00000264010 MAPK14Q16539 360 aa15.02■□□□□ -0
CTCF-201ENST00000264010 PAN3Q58A45 887 aaKnown RBP15.02■□□□□ -0
CTCF-201ENST00000264010 Q6ZS52 159 aa15.02■□□□□ -0
CTCF-201ENST00000264010 COMTD1Q86VU5 262 aa15.02■□□□□ -0
CTCF-201ENST00000264010 TMEM151BQ8IW70 566 aa15.02■□□□□ -0
CTCF-201ENST00000264010 BBS1Q8NFJ9 593 aa15.02■□□□□ -0
CTCF-201ENST00000264010 FBXW5Q969U6 566 aa15.02■□□□□ -0
CTCF-201ENST00000264010 ZNF578Q96N58 590 aaPredicted RBP15.02■□□□□ -0
CTCF-201ENST00000264010 C1QTNF6Q9BXI9 259 aa15.02■□□□□ -0
CTCF-201ENST00000264010 HEATR5BQ9P2D3 2071 aa15.02■□□□□ -0
CTCF-201ENST00000264010 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.02□□□□□ -0.01
CTCF-201ENST00000264010 SDC3O75056 442 aa15.02□□□□□ -0.01
CTCF-201ENST00000264010 FARS2O95363 451 aaKnown RBP15.02□□□□□ -0.01
CTCF-201ENST00000264010 ACTA2P62736 377 aa15.02□□□□□ -0.01
CTCF-201ENST00000264010 ACTG2P63267 376 aa15.02□□□□□ -0.01
CTCF-201ENST00000264010 EEF1A1P68104 462 aaKnown RBP15.02□□□□□ -0.01
CTCF-201ENST00000264010 TFF2Q03403 129 aa15.02□□□□□ -0.01
CTCF-201ENST00000264010 PRICKLE4Q2TBC4 344 aa15.02□□□□□ -0.01
CTCF-201ENST00000264010 CNIH2Q6PI25 160 aa15.02□□□□□ -0.01
CTCF-201ENST00000264010 QSOX2Q6ZRP7 698 aa15.02□□□□□ -0.01
CTCF-201ENST00000264010 OR51Q1Q8NH59 317 aa15.02□□□□□ -0.01
CTCF-201ENST00000264010 WSB2Q9NYS7 404 aaPredicted RBP15.02□□□□□ -0.01
CTCF-201ENST00000264010 NKX2-2O95096 273 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 ZNF35P13682 527 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 RBM34P42696 430 aaKnown RBP15.01□□□□□ -0.01
CTCF-201ENST00000264010 CAV3P56539 151 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 UBE2IP63279 158 aaKnown RBP15.01□□□□□ -0.01
CTCF-201ENST00000264010 CRMP1Q14194 572 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 SLC29A4Q7RTT9 530 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 ZMYND19Q96E35 227 aaPredicted RBP15.01□□□□□ -0.01
CTCF-201ENST00000264010 RADILQ96JH8 1075 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 OR10A5Q9H207 317 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 LGALS8O00214 317 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 ARPC5O15511 151 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 RENP00797 406 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 CELA2BP08218 269 aaPredicted RBP15.01□□□□□ -0.01
CTCF-201ENST00000264010 TACSTD2P09758 323 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 CD27P26842 260 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 TDGQ13569 410 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 ZSCAN1Q8NBB4 408 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 CMC2Q9NRP2 79 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 PILRAQ9UKJ1 303 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 SERINC4A6NH21 518 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 SIX6O95475 246 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 NIPAL3Q6P499 406 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 SYT14Q8NB59 555 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 SDR9C7Q8NEX9 313 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 TAPBPLQ9BX59 468 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 IFT22Q9H7X7 185 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 ASH2LQ9UBL3 628 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 GMEB2Q9UKD1 530 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 PCDHGB2Q9Y5G2 931 aa15.01□□□□□ -0.01
CTCF-201ENST00000264010 EFCAB7A8K855 629 aa15□□□□□ -0.01
CTCF-201ENST00000264010 RNF13O43567 381 aa15□□□□□ -0.01
CTCF-201ENST00000264010 GYPBP06028 91 aa15□□□□□ -0.01
CTCF-201ENST00000264010 SMIM10L1P0DMW3 83 aa15□□□□□ -0.01
CTCF-201ENST00000264010 AADACL4Q5VUY2 407 aa15□□□□□ -0.01
CTCF-201ENST00000264010 CMIPQ8IY22 773 aa15□□□□□ -0.01
CTCF-201ENST00000264010 SLC43A2Q8N370 569 aa15□□□□□ -0.01
CTCF-201ENST00000264010 SAMD12Q8N8I0 201 aa15□□□□□ -0.01
CTCF-201ENST00000264010 OR51L1Q8NGJ5 315 aa15□□□□□ -0.01
CTCF-201ENST00000264010 SMIM10Q96HG1 83 aa15□□□□□ -0.01
CTCF-201ENST00000264010 FBXO34Q9NWN3 711 aa15□□□□□ -0.01
CTCF-201ENST00000264010 TEX51A0A1B0GUA7 166 aa15□□□□□ -0.01
CTCF-201ENST00000264010 M0R036 132 aa15□□□□□ -0.01
CTCF-201ENST00000264010 PDCD5O14737 125 aa15□□□□□ -0.01
CTCF-201ENST00000264010 DUX1O43812 170 aa15□□□□□ -0.01
CTCF-201ENST00000264010 LIMS3P0CW19 117 aa15□□□□□ -0.01
CTCF-201ENST00000264010 LIMS4P0CW20 117 aa15□□□□□ -0.01
CTCF-201ENST00000264010 HSD17B7P56937 341 aa15□□□□□ -0.01
CTCF-201ENST00000264010 PLXDC1Q8IUK5 500 aa15□□□□□ -0.01
CTCF-201ENST00000264010 FAM160A2Q8N612 972 aaPredicted RBP15□□□□□ -0.01
CTCF-201ENST00000264010 ZNF248Q8NDW4 579 aa15□□□□□ -0.01
CTCF-201ENST00000264010 NXF2Q9GZY0 626 aaKnown RBP15□□□□□ -0.01
CTCF-201ENST00000264010 LSM2Q9Y333 95 aaKnown RBP15□□□□□ -0.01
CTCF-201ENST00000264010 CYR61O00622 381 aa15□□□□□ -0.01
CTCF-201ENST00000264010 NSA2O95478 260 aaKnown RBP15□□□□□ -0.01
CTCF-201ENST00000264010 NTN1O95631 604 aa15□□□□□ -0.01
CTCF-201ENST00000264010 PNMTP11086 282 aa15□□□□□ -0.01
CTCF-201ENST00000264010 MAKP20794 623 aa15□□□□□ -0.01
CTCF-201ENST00000264010 PPP1CAP62136 330 aa15□□□□□ -0.01
CTCF-201ENST00000264010 SDR16C5Q8N3Y7 309 aa15□□□□□ -0.01
CTCF-201ENST00000264010 DAZLQ92904 295 aaKnown RBP15□□□□□ -0.01
CTCF-201ENST00000264010 C4orf36Q96KX1 117 aa15□□□□□ -0.01
CTCF-201ENST00000264010 RANBP3Q9H6Z4 567 aaPredicted RBP15□□□□□ -0.01
CTCF-201ENST00000264010 NTMQ9P121 344 aa15□□□□□ -0.01
CTCF-201ENST00000264010 ALG5Q9Y673 324 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms