RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 GGT1P19440 569 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 HTR2AP28223 471 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 TAS2R41P59536 307 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 SLC25A3Q00325 362 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 RASGEF1BQ0VAM2 473 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 BNIP2Q12982 314 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 PDK3Q15120 406 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 FBXL19-AS1Q494R0 122 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 C1orf140Q5VVS0 124 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 GLYATQ6IB77 296 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 PAQR6Q6TCH4 344 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 FKBP9P1Q75LS8 142 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 CBLL1Q75N03 491 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 CARM1Q86X55 608 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 LIX1LQ8IVB5 337 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 GPR32P1Q8NGA4 272 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 OR6T1Q8NGN1 323 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 VANGL1Q8TAA9 524 aaPredicted RBP10.07□□□□□ -0.8
SF3B6-201ENST00000233468 GEMIN6Q8WXD5 167 aaKnown RBP10.07□□□□□ -0.8
SF3B6-201ENST00000233468 ROBO4Q8WZ75 1007 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 RNASE6Q93091 150 aaKnown RBP10.07□□□□□ -0.8
SF3B6-201ENST00000233468 ARL5BQ96KC2 179 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 SPOCK3Q9BQ16 436 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 SRXN1Q9BYN0 137 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 UCK2Q9BZX2 261 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 OR11A1Q9GZK7 315 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 PCDHAC1Q9H158 963 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 C1orf21Q9H246 121 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 GORASP2Q9H8Y8 452 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 KLHL13Q9P2N7 655 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 MTORP42345 2549 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 SPG11Q96JI7 2443 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 DNAJC13O75165 2243 aa10.07□□□□□ -0.8
SF3B6-201ENST00000233468 ITPR3Q14573 2671 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 TRAV36DV7A0A075B6V5 113 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 A0A087WUJ7 227 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 NKX2-6A6NCS4 301 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 ZNF724A8MTY0 619 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 TMEM229AB2RXF0 380 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 CHP2O43745 196 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 TNFSF13O75888 250 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 SMNDC1O75940 238 aaKnown RBP eCLIP10.06□□□□□ -0.8
SF3B6-201ENST00000233468 OR5F1O95221 314 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 SERPINA1P01009 418 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 THRBP10828 461 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 FPR1P21462 350 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 UQCRC1P31930 480 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 KIR2DL2P43627 348 aaPredicted RBP10.06□□□□□ -0.8
SF3B6-201ENST00000233468 PCYT1AP49585 367 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 RASSF2P50749 326 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 RIPPLY3P57055 190 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 SIRPAP78324 504 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 FOXF2Q12947 444 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 CEACAM7Q14002 265 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 OR7A5Q15622 319 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 DNAL1Q4LDG9 190 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 IFI44LQ53G44 452 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 ENTPD8Q5MY95 495 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 FAM69AQ5T7M9 428 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 TTC33Q6PID6 262 aaPredicted RBP10.06□□□□□ -0.8
SF3B6-201ENST00000233468 DEF8Q6ZN54 512 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 GALNT5Q7Z7M9 940 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 CYP4Z1Q86W10 505 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 RBM15BQ8NDT2 890 aaKnown RBP10.06□□□□□ -0.8
SF3B6-201ENST00000233468 OR6S1Q8NH40 331 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 MFSD8Q8NHS3 518 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 ADAMTS16Q8TE57 1224 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 STARD4Q96DR4 205 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 TMEM43Q9BTV4 400 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 SF3B5Q9BWJ5 86 aaKnown RBP10.06□□□□□ -0.8
SF3B6-201ENST00000233468 RBM24Q9BX46 236 aaKnown RBP10.06□□□□□ -0.8
SF3B6-201ENST00000233468 SLC19A3Q9BZV2 496 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 MUC13Q9H3R2 512 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 BCO1Q9HAY6 547 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 PARPBPQ9NWS1 579 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 ELOVL5Q9NYP7 299 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 JKAMPQ9P055 326 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 C6orf203Q9P0P8 240 aaPredicted RBP10.06□□□□□ -0.8
SF3B6-201ENST00000233468 PRPF19Q9UMS4 504 aaKnown RBP10.06□□□□□ -0.8
SF3B6-201ENST00000233468 USP22Q9UPT9 525 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 SNX13Q9Y5W8 968 aa10.06□□□□□ -0.8
SF3B6-201ENST00000233468 HTR3EA5X5Y0 456 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 LIPT2A6NK58 231 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 CPSF4LA6NMK7 179 aaKnown RBP10.05□□□□□ -0.8
SF3B6-201ENST00000233468 A8MXE2 369 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 SMAD9O15198 467 aaKnown RBP10.05□□□□□ -0.8
SF3B6-201ENST00000233468 NPIPB7O75200 414 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 ATP5HO75947 161 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 ITGA2P17301 1181 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 TCN1P20061 433 aaPredicted RBP10.05□□□□□ -0.8
SF3B6-201ENST00000233468 CRYBA2P53672 197 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 CDH12P55289 794 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 SORDQ00796 357 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 TFF3Q07654 80 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 ST3GAL3Q11203 375 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 GUSBP1Q15486 140 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 NPTX1Q15818 432 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 TMEM225Q6GV28 225 aa10.05□□□□□ -0.8
SF3B6-201ENST00000233468 PLXDC2Q6UX71 529 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms