RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 MAGEA8P43361 318 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 CLK1P49759 484 aaKnown RBP13.2□□□□□ -0.3
UPK3A-201ENST00000216211 ZNF83P51522 516 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 SLC16A1P53985 500 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 SPOCK1Q08629 439 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 RIPK1Q13546 671 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 CYLC2Q14093 348 aaPredicted RBP13.2□□□□□ -0.3
UPK3A-201ENST00000216211 MAPRE2Q15555 327 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 COX20Q5RI15 118 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 ZNF621Q6ZSS3 439 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 DTX2Q86UW9 622 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 ARHGAP24Q8N264 748 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 TRIML2Q8N7C3 387 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 PNPT1Q8TCS8 783 aaKnown RBP13.2□□□□□ -0.3
UPK3A-201ENST00000216211 WDR60Q8WVS4 1066 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 TRNT1Q96Q11 434 aaKnown RBP13.2□□□□□ -0.3
UPK3A-201ENST00000216211 OR52E6Q96RD3 313 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 ASB6Q9NWX5 421 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 TMEM181Q9P2C4 612 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 OSGIN1Q9UJX0 560 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 SLC25A15Q9Y619 301 aa13.2□□□□□ -0.3
UPK3A-201ENST00000216211 YLPM1P49750 1951 aaKnown RBP13.2□□□□□ -0.3
UPK3A-201ENST00000216211 AGAP5A6NIR3 686 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 PGRP06401 933 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 ITGA5P08648 1049 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 TACR3P29371 465 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 HTR3AP46098 478 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 POLR2HP52434 150 aaKnown RBP13.19□□□□□ -0.3
UPK3A-201ENST00000216211 MXRA7P84157 204 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 GABRA6Q16445 453 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 C9orf135Q5VTT2 229 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 TMEM108Q6UXF1 575 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 CASP12Q6UXS9 341 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 LRRC74BQ6ZQY2 392 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 SSX8Q7RTT4 187 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 SNX32Q86XE0 403 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 CMIPQ8IY22 773 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 OR52E4Q8NGH9 312 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 MCUR1Q96AQ8 359 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 DDIT4LQ96D03 193 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 HS6ST2Q96MM7 605 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 C1QTNF6Q9BXI9 259 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 FAIMQ9NVQ4 179 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 TMEM45AQ9NWC5 275 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 TAS2R16Q9NYV7 291 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 MALT1Q9UDY8 824 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 TRAPPC4Q9Y296 219 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 B3GALT5Q9Y2C3 310 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 ABCA1O95477 2261 aa13.19□□□□□ -0.3
UPK3A-201ENST00000216211 SONP18583 2426 aaKnown RBP13.18□□□□□ -0.3
UPK3A-201ENST00000216211 ZC3H12DA2A288 527 aaKnown RBP13.18□□□□□ -0.3
UPK3A-201ENST00000216211 E7EQL1 145 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 M0R1B8 84 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 ZNF208O43345 1280 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 SSX4O60224 188 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 CRLF1O75462 422 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 NR2F1P10589 423 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 IDO1P14902 403 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 IL7RP16871 459 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 RPS4Y1P22090 263 aaKnown RBP13.18□□□□□ -0.3
UPK3A-201ENST00000216211 ANXA11P50995 505 aaKnown RBP13.18□□□□□ -0.3
UPK3A-201ENST00000216211 STX1BP61266 288 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 SLC35A1P78382 337 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 H3F3AP84243 136 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 EPS8Q12929 822 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 MRPL2Q5T653 305 aaKnown RBP13.18□□□□□ -0.3
UPK3A-201ENST00000216211 AGAP6Q5VW22 663 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 SLC22A25Q6T423 547 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 KLHL17Q6TDP4 642 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 DNM1P46Q6ZS02 220 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 PMM1Q92871 262 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 NAA11Q9BSU3 229 aaPredicted RBP13.18□□□□□ -0.3
UPK3A-201ENST00000216211 GRIP2Q9C0E4 1043 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 RASSF4Q9H2L5 321 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 MTHFD2LQ9H903 347 aaPredicted RBP13.18□□□□□ -0.3
UPK3A-201ENST00000216211 EFCAB1Q9HAE3 211 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 SDR39U1Q9NRG7 319 aaPredicted RBP13.18□□□□□ -0.3
UPK3A-201ENST00000216211 UPB1Q9UBR1 384 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 POU2F3Q9UKI9 436 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 FLVCR1Q9Y5Y0 555 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 GPR45Q9Y5Y3 372 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 ALPK2Q86TB3 2170 aa13.18□□□□□ -0.3
UPK3A-201ENST00000216211 FBN1P35555 2871 aaKnown RBP13.17□□□□□ -0.3
UPK3A-201ENST00000216211 PDLIM1O00151 329 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 EIF1BO60739 113 aaKnown RBP13.17□□□□□ -0.3
UPK3A-201ENST00000216211 TP53P04637 393 aaPredicted RBP13.17□□□□□ -0.3
UPK3A-201ENST00000216211 DBIP07108 87 aaKnown RBP13.17□□□□□ -0.3
UPK3A-201ENST00000216211 PTAFRP25105 342 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 CD40P25942 277 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 SLC1A3P43003 542 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 TXNL4AP83876 142 aaKnown RBP13.17□□□□□ -0.3
UPK3A-201ENST00000216211 SLC25A3Q00325 362 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 GNA13Q14344 377 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 MAPK11Q15759 364 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 AGKQ53H12 422 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 OR7E24Q6IFN5 339 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 C11orf71Q6IPW1 123 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 B3GLCTQ6Y288 498 aa13.17□□□□□ -0.3
UPK3A-201ENST00000216211 MIER2Q8N344 545 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms