RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 OPN5Q6U736 354 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 IL20RBQ6UXL0 311 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 SLC43A2Q8N370 569 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 LIPHQ8WWY8 451 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 COX4I2Q96KJ9 171 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 B3GNT4Q9C0J1 378 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 WDR12Q9GZL7 423 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 OR51E2Q9H255 320 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 HINT3Q9NQE9 182 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TBCCD1Q9NVR7 557 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 MED11Q9P086 117 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 LOC400499M0QZD8 3231 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 NDUFB2O95178 105 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 PPP1R3DO95685 299 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 SLC6A6P31641 620 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 SUMO3P55854 103 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 MLF1P58340 268 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 AADACL4Q5VUY2 407 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 C9orf43Q8TAL5 461 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 S100ZQ8WXG8 99 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 RNF167Q9H6Y7 350 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 NANSQ9NR45 359 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 PPP4R1LQ9P1A2 415 aa17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 MRPS18BQ9Y676 258 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1A-201ENST00000162749 FAM183AA6NL82 134 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TP53I11O14683 189 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 PRKCAP17252 672 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 SSR4P51571 173 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 PSMD7P51665 324 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 POLR2HP52434 150 aaKnown RBP17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 IFITM3Q01628 133 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 ZNF367Q7RTV3 350 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 ADGRG3Q86Y34 549 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 ASB15Q8WXK1 588 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 NPAS1Q99742 590 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 CMC2Q9NRP2 79 aa17.85■□□□□ 0.45
TNFRSF1A-201ENST00000162749 IGLV3-32A0A0A0MS00 114 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TMED7-TICAM2A0A0A6YYA0 188 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 ZC3H12DA2A288 527 aaKnown RBP17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 MCIDASD6RGH6 385 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 HSMCR30P0CW71 290 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 RPS5P46782 204 aaKnown RBP17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 GABREP78334 506 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 LTBQ06643 244 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 CHAF1BQ13112 559 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 ATP1A4Q13733 1029 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 INPP5JQ15735 1006 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 ZNF362Q5T0B9 420 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 ARSKQ6UWY0 536 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TMPRSS12Q86WS5 348 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 CPOQ8IVL8 374 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TMEM234Q8WY98 164 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 ST8SIA1Q92185 356 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TAAR8Q969N4 342 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TMED7Q9Y3B3 224 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 CFAP47Q6ZTR5 3102 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 SNTNA6NMZ2 147 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 ASAH2BP0C7U1 165 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 PEPDP12955 493 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TUBA1BP68363 451 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 INAQ16352 499 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 RGS21Q2M5E4 152 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 NXNL2Q5VZ03 156 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 C19orf48Q6RUI8 117 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TUBA1AQ71U36 451 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 SNX29P2Q8IUI4 249 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 C10orf53Q8N6V4 93 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 BBS1Q8NFJ9 593 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 DACH2Q96NX9 599 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 CENPOQ9BU64 300 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TAPBPLQ9BX59 468 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 SDHAF3Q9NRP4 125 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 BAIAP2Q9UQB8 552 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 VDAC3Q9Y277 283 aa17.84■□□□□ 0.45
TNFRSF1A-201ENST00000162749 SUSD5O60279 629 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 IMPDH2P12268 514 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 MTNR1AP48039 350 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 CDH11P55287 796 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 MED22Q15528 200 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 PRAMEF20Q5VT98 475 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 C1QL3Q5VWW1 255 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 CXXC5Q7LFL8 322 aaKnown RBP17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 SNRNP27Q8WVK2 155 aaKnown RBP17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 RFKQ969G6 155 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 TMEM80Q96HE8 168 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 MGLLQ99685 303 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 FAM117AQ9C073 453 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 FN3KQ9H479 309 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 CHRNA9Q9UGM1 479 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 HIF3AQ9Y2N7 669 aa17.83■□□□□ 0.45
TNFRSF1A-201ENST00000162749 DCHS1Q96JQ0 3298 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 TMEM72A0PK05 275 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 METTL15A6NJ78 407 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NPIPB7O75200 414 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SLC25A12O75746 678 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OCM2P0CE71 109 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OCMP0CE72 109 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CSRP1P21291 193 aaKnown RBP17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MSX1P28360 303 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NOS3P29474 1203 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms