RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 NcdnQ9Z0E0 729 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Rpl23a-ps3A0A140T8M7 156 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Hoxb5P09079 269 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 CfpP11680 464 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 LumP51885 338 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Rpl23aP62751 156 aaKnown RBP13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 C130050O18RikQ497Y9 356 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Irf4Q64287 450 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Ppp1r3bQ8C767 284 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 NagsQ8R4H7 527 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr820Q8VFU5 312 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Pinx1Q9CZX5 332 aaKnown RBP13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Tmem37Q9JJV3 211 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 4931429L15RikE9PVU2 379 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Hoxd12P23812 268 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Rps25P62852 125 aaKnown RBP13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 VaspP70460 375 aaKnown RBP13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Slc35f3Q1LZI2 421 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Pgap2Q3TQR0 254 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Fbxo34Q80XI1 695 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Lypd4Q8BVP6 246 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 DrgxQ8BYH0 263 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr340Q8VGL0 312 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Lrg1Q91XL1 342 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Steap4Q923B6 470 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 ClcnkbQ9WUB6 687 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Cdc20bD3Z3I0 519 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Gm8265K7N6Y8 158 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 ArafP04627 604 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Mtf1Q07243 675 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Dag1Q62165 893 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Sema4cQ64151 834 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 4921517D22RikQ8CET0 269 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Gas2l1Q8JZP9 678 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Abhd6Q8R2Y0 336 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr473Q8VG44 310 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Smim14Q91VT8 99 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 2210010C04RikQ9CPN9 247 aaKnown RBP13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Aldh7a1Q9DBF1 539 aa13.12□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Fignl2J3QK54 644 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Man2b2O54782 1018 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Slc10a2P70172 348 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Dlk1Q09163 385 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Foxred1Q3TQB2 487 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Gm2016Q3TQZ4 144 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr1275Q7TQY8 312 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Tmbim1Q8BJZ3 309 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Med19Q8C1S0 244 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Slc43a2Q8CGA3 568 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Vmn1r231Q8R2A3 311 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Prl8a9Q9CQ58 241 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Nudt21Q9CQF3 227 aaKnown RBP13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 GatmQ9D964 423 aaKnown RBP13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Amdhd1Q9DBA8 426 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Sgk3Q9ERE3 496 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Mrpl39Q9JKF7 336 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr1130A0A1L1SQT2 314 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr1129A2AV41 314 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Zfp40B1B1D3 796 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Vmn2r69G3XA45 850 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Rap1aP62835 184 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Rhox4fQ2MDF8 205 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Rhox4cQ2MDG1 205 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Nupl2Q8CIC2 420 aaKnown RBP13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Ddit4lQ8VHZ5 193 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr116Q923Q6 321 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Rap1bQ99JI6 184 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 RragcQ99K70 398 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Obp1aQ9D3H2 163 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Rhox4aQ9D3I8 205 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Rnf138rt1Q9D9M9 248 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Ntn4Q9JI33 628 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr1291-ps1A0A286YE47 326 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 H2-T10F6T1I5 379 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 FiglaO55208 194 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 HcrtO55241 130 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Kcnj1O88335 372 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 CgaP01216 120 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Tbrg1Q3UB74 406 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr1196Q7TR14 314 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Zfp3Q8BLB0 497 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Nyap2Q8BM65 682 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Eif4e2Q8BMB3 245 aaKnown RBP13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Nmnat2Q8BNJ3 307 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Slc25a41Q8BVN7 312 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Zbtb37Q8C3U9 504 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr768Q8VGC4 312 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Lpcat3Q91V01 487 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Rhox2aQ9D4Y3 191 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Cldnd2Q9D9H2 167 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 RgccQ9DBX1 137 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Syngr4Q9Z1L2 233 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Topaz1E5FYH1 1653 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr1034A0A1L1ST14 310 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Cped1B2RX70 1026 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Olfr419E9Q0Y7 313 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Ccl26F8VQM2 93 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Ssr4Q62186 172 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Nptx1Q62443 432 aa13.11□□□□□ -0.31
Col3a1-201ENSMUST00000087883 Zik1Q80YP6 463 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms