RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C YHR078WP38799 552 aa6.12□□□□□ -1.43
BLS1YLR408C ALY2P47029 1046 aa6.12□□□□□ -1.43
BLS1YLR408C YJR142WP47173 342 aa6.12□□□□□ -1.43
BLS1YLR408C EXG2P52911 562 aa6.12□□□□□ -1.43
BLS1YLR408C PRC1P00729 532 aa6.11□□□□□ -1.43
BLS1YLR408C SAP190P36123 1033 aa6.11□□□□□ -1.43
BLS1YLR408C ZIP2P53061 704 aa6.11□□□□□ -1.43
BLS1YLR408C SLU7Q02775 382 aaKnown RBP6.11□□□□□ -1.43
BLS1YLR408C CLU1Q03690 1277 aaKnown RBP6.11□□□□□ -1.43
BLS1YLR408C YDR338CQ05497 695 aa6.11□□□□□ -1.43
BLS1YLR408C SFP1P32432 683 aa6.1□□□□□ -1.43
BLS1YLR408C HOG1P32485 435 aa6.1□□□□□ -1.43
BLS1YLR408C FLR1P38124 548 aa6.1□□□□□ -1.43
BLS1YLR408C MNN10P50108 393 aaKnown RBP6.1□□□□□ -1.43
BLS1YLR408C YGR161W-CQ3E744 92 aa6.1□□□□□ -1.43
BLS1YLR408C RAD18P10862 487 aa6.09□□□□□ -1.43
BLS1YLR408C SEC21P32074 935 aaKnown RBP6.09□□□□□ -1.43
BLS1YLR408C RPN10P38886 268 aaKnown RBP6.09□□□□□ -1.43
BLS1YLR408C MGS1P40151 587 aa6.09□□□□□ -1.43
BLS1YLR408C ADR1P07248 1323 aa6.08□□□□□ -1.44
BLS1YLR408C TUB3P09734 445 aaKnown RBP6.08□□□□□ -1.44
BLS1YLR408C SFL1P20134 766 aa6.08□□□□□ -1.44
BLS1YLR408C MIH1P23748 554 aa6.08□□□□□ -1.44
BLS1YLR408C KAR4P25583 335 aa6.08□□□□□ -1.44
BLS1YLR408C DCG1P32460 244 aa6.08□□□□□ -1.44
BLS1YLR408C PCM1P38628 557 aaKnown RBP6.08□□□□□ -1.44
BLS1YLR408C SHR5P41912 237 aa6.08□□□□□ -1.44
BLS1YLR408C SSY5P47002 699 aa6.08□□□□□ -1.44
BLS1YLR408C MET13P53128 600 aa6.08□□□□□ -1.44
BLS1YLR408C ASI2P53895 289 aa6.08□□□□□ -1.44
BLS1YLR408C NHX1Q04121 633 aa6.08□□□□□ -1.44
BLS1YLR408C TMA10Q06177 86 aa6.08□□□□□ -1.44
BLS1YLR408C ENB1Q08299 606 aa6.08□□□□□ -1.44
BLS1YLR408C BNA2P47125 453 aa6.07□□□□□ -1.44
BLS1YLR408C MCM6P53091 1017 aaKnown RBP6.07□□□□□ -1.44
BLS1YLR408C ATG33Q06485 197 aa6.07□□□□□ -1.44
BLS1YLR408C GPR1Q12361 961 aa6.07□□□□□ -1.44
BLS1YLR408C PRP4P20053 465 aaKnown RBP6.06□□□□□ -1.44
BLS1YLR408C HSL7P38274 827 aa6.06□□□□□ -1.44
BLS1YLR408C MSS4P38994 779 aa6.06□□□□□ -1.44
BLS1YLR408C MPT5P39016 859 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
BLS1YLR408C YGL081WP53156 320 aa6.06□□□□□ -1.44
BLS1YLR408C YNR029CP53729 429 aaKnown RBP6.06□□□□□ -1.44
BLS1YLR408C MUS81Q04149 632 aaPredicted RBP6.06□□□□□ -1.44
BLS1YLR408C ESC8Q08119 714 aa6.06□□□□□ -1.44
BLS1YLR408C SWM1Q12379 170 aa6.06□□□□□ -1.44
BLS1YLR408C LAS17Q12446 633 aa6.06□□□□□ -1.44
BLS1YLR408C PMA1P05030 918 aaKnown RBP6.05□□□□□ -1.44
BLS1YLR408C ERG5P54781 538 aa6.05□□□□□ -1.44
BLS1YLR408C GIN4Q12263 1142 aa6.05□□□□□ -1.44
BLS1YLR408C YLR149CQ99296 730 aa6.05□□□□□ -1.44
BLS1YLR408C HMG1P12683 1054 aa6.04□□□□□ -1.44
BLS1YLR408C CTS1P29029 562 aa6.04□□□□□ -1.44
BLS1YLR408C PZF1P39933 429 aa6.04□□□□□ -1.44
BLS1YLR408C VHR1P40522 640 aa6.04□□□□□ -1.44
BLS1YLR408C CRR1Q05790 422 aa6.04□□□□□ -1.44
BLS1YLR408C PEX19Q07418 342 aa6.04□□□□□ -1.44
BLS1YLR408C CTF13P35203 478 aa6.03□□□□□ -1.44
BLS1YLR408C CRP1P38845 465 aaKnown RBP6.03□□□□□ -1.44
BLS1YLR408C SAK1P38990 1142 aa6.03□□□□□ -1.44
BLS1YLR408C TAF1P46677 1066 aa6.03□□□□□ -1.44
BLS1YLR408C HLJ1P48353 224 aa6.03□□□□□ -1.44
BLS1YLR408C NPY1P53164 384 aa6.03□□□□□ -1.44
BLS1YLR408C SDA1P53313 767 aaKnown RBP6.03□□□□□ -1.44
BLS1YLR408C CCR4P31384 837 aaKnown RBP6.02□□□□□ -1.45
BLS1YLR408C YKR018CP36114 725 aa6.02□□□□□ -1.45
BLS1YLR408C SHM2P37291 469 aaKnown RBP6.02□□□□□ -1.45
BLS1YLR408C UBP12P39538 1254 aa6.02□□□□□ -1.45
BLS1YLR408C PFA3P42836 336 aa6.02□□□□□ -1.45
BLS1YLR408C PMT3P47190 753 aa6.02□□□□□ -1.45
BLS1YLR408C AIM14P53109 570 aa6.02□□□□□ -1.45
BLS1YLR408C THI73Q07904 523 aa6.02□□□□□ -1.45
BLS1YLR408C TRM11Q12463 433 aa6.02□□□□□ -1.45
BLS1YLR408C YLR415CO13578 112 aa6.01□□□□□ -1.45
BLS1YLR408C YKR051WP36142 418 aa6.01□□□□□ -1.45
BLS1YLR408C MIP6P38760 659 aaKnown RBP6.01□□□□□ -1.45
BLS1YLR408C YFL052WP43551 465 aa6.01□□□□□ -1.45
BLS1YLR408C ASM4Q05166 528 aa6.01□□□□□ -1.45
BLS1YLR408C Q0142Q9ZZW4 58 aa6.01□□□□□ -1.45
BLS1YLR408C TRP4P07285 380 aaPredicted RBP6□□□□□ -1.45
BLS1YLR408C PFK1P16861 987 aaKnown RBP6□□□□□ -1.45
BLS1YLR408C NGG1P32494 702 aa6□□□□□ -1.45
BLS1YLR408C BUL1P48524 976 aa6□□□□□ -1.45
BLS1YLR408C UBC9P50623 157 aaPredicted RBP6□□□□□ -1.45
BLS1YLR408C PKH1Q03407 766 aa6□□□□□ -1.45
BLS1YLR408C RPN7Q06103 429 aaKnown RBP6□□□□□ -1.45
BLS1YLR408C GUD1Q07729 489 aa6□□□□□ -1.45
BLS1YLR408C CAD1P24813 409 aaKnown RBP5.99□□□□□ -1.45
BLS1YLR408C HCM1P25364 564 aa5.99□□□□□ -1.45
BLS1YLR408C YCR015CP25616 317 aa5.99□□□□□ -1.45
BLS1YLR408C RPP1P38786 293 aa5.99□□□□□ -1.45
BLS1YLR408C DOT6P40059 670 aaKnown RBP5.99□□□□□ -1.45
BLS1YLR408C MTR3P48240 250 aaPredicted RBP5.99□□□□□ -1.45
BLS1YLR408C NTO1Q12311 748 aa5.99□□□□□ -1.45
BLS1YLR408C GRX4P32642 244 aa5.98□□□□□ -1.45
BLS1YLR408C SIC1P38634 284 aa5.98□□□□□ -1.45
BLS1YLR408C CKB2P38930 258 aa5.98□□□□□ -1.45
BLS1YLR408C GIP4P39732 760 aa5.98□□□□□ -1.45
BLS1YLR408C PHO23P50947 330 aa5.98□□□□□ -1.45
BLS1YLR408C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms