RNA–Protein interactions for RNA: YLL042C

ATG10, Transcript of Conserved E2-like conjugating enzyme, yeast

Gene ATG10, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG10	YLL042C	YLR224W	Q05947	369 aa		4.3	□□□□□ -1.72
ATG10	YLL042C	KCS1	Q12494	1050 aa		4.3	□□□□□ -1.72
ATG10	YLL042C	PRC1	P00729	532 aa		4.29	□□□□□ -1.72
ATG10	YLL042C	HMG1	P12683	1054 aa		4.29	□□□□□ -1.72
ATG10	YLL042C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
ATG10	YLL042C	TOD6	P34219	525 aa		4.29	□□□□□ -1.72
ATG10	YLL042C	PCM1	P38628	557 aa	Known RBP	4.29	□□□□□ -1.72
ATG10	YLL042C	YHR078W	P38799	552 aa		4.29	□□□□□ -1.72
ATG10	YLL042C	CRP1	P38845	465 aa	Known RBP	4.29	□□□□□ -1.72
ATG10	YLL042C	PUS2	P53167	370 aa		4.29	□□□□□ -1.72
ATG10	YLL042C	ATG33	Q06485	197 aa		4.29	□□□□□ -1.72
ATG10	YLL042C	GPR1	Q12361	961 aa		4.29	□□□□□ -1.72
ATG10	YLL042C	RPP2A	P05319	106 aa	Known RBP	4.28	□□□□□ -1.72
ATG10	YLL042C	PRP4	P20053	465 aa	Known RBP	4.28	□□□□□ -1.72
ATG10	YLL042C	SED4	P25365	1065 aa		4.28	□□□□□ -1.72
ATG10	YLL042C	SEC21	P32074	935 aa	Known RBP	4.28	□□□□□ -1.72
ATG10	YLL042C	GRX4	P32642	244 aa		4.28	□□□□□ -1.72
ATG10	YLL042C	SAP190	P36123	1033 aa		4.28	□□□□□ -1.72
ATG10	YLL042C	PLB1	P39105	664 aa		4.28	□□□□□ -1.72
ATG10	YLL042C	ZIP2	P53061	704 aa		4.28	□□□□□ -1.72
ATG10	YLL042C	AIM14	P53109	570 aa		4.28	□□□□□ -1.72
ATG10	YLL042C	NPC2	Q12408	173 aa		4.28	□□□□□ -1.72
ATG10	YLL042C	TUB3	P09734	445 aa	Known RBP	4.27	□□□□□ -1.73
ATG10	YLL042C	LST4	P34239	828 aa		4.27	□□□□□ -1.73
ATG10	YLL042C	SHR5	P41912	237 aa		4.27	□□□□□ -1.73
ATG10	YLL042C	HLJ1	P48353	224 aa		4.27	□□□□□ -1.73
ATG10	YLL042C	GPG1	P53130	126 aa		4.27	□□□□□ -1.73
ATG10	YLL042C	YGL081W	P53156	320 aa		4.27	□□□□□ -1.73
ATG10	YLL042C	SDA1	P53313	767 aa	Known RBP	4.27	□□□□□ -1.73
ATG10	YLL042C	NHX1	Q04121	633 aa		4.27	□□□□□ -1.73
ATG10	YLL042C	COG8	Q04632	607 aa		4.27	□□□□□ -1.73
ATG10	YLL042C	ASM4	Q05166	528 aa		4.27	□□□□□ -1.73
ATG10	YLL042C	THI73	Q07904	523 aa		4.27	□□□□□ -1.73
ATG10	YLL042C	YLR149C	Q99296	730 aa		4.27	□□□□□ -1.73
ATG10	YLL042C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
ATG10	YLL042C	RPN10	P38886	268 aa	Known RBP	4.26	□□□□□ -1.73
ATG10	YLL042C	MSS4	P38994	779 aa		4.26	□□□□□ -1.73
ATG10	YLL042C	SSY5	P47002	699 aa		4.26	□□□□□ -1.73
ATG10	YLL042C	BNA2	P47125	453 aa		4.26	□□□□□ -1.73
ATG10	YLL042C	UBC9	P50623	157 aa	Predicted RBP	4.26	□□□□□ -1.73
ATG10	YLL042C	CRR1	Q05790	422 aa		4.26	□□□□□ -1.73
ATG10	YLL042C	TMA10	Q06177	86 aa		4.26	□□□□□ -1.73
ATG10	YLL042C	GUP2	Q08929	609 aa		4.26	□□□□□ -1.73
ATG10	YLL042C	Q0142	Q9ZZW4	58 aa		4.26	□□□□□ -1.73
ATG10	YLL042C	TSR4	P25040	408 aa		4.25	□□□□□ -1.73
ATG10	YLL042C	KAR4	P25583	335 aa		4.25	□□□□□ -1.73
ATG10	YLL042C	CCR4	P31384	837 aa	Known RBP	4.25	□□□□□ -1.73
ATG10	YLL042C	YKR051W	P36142	418 aa		4.25	□□□□□ -1.73
ATG10	YLL042C	YJR096W	P47137	282 aa		4.25	□□□□□ -1.73
ATG10	YLL042C	EXG2	P52911	562 aa		4.25	□□□□□ -1.73
ATG10	YLL042C	ASI2	P53895	289 aa		4.25	□□□□□ -1.73
ATG10	YLL042C	MUS81	Q04149	632 aa	Predicted RBP	4.25	□□□□□ -1.73
ATG10	YLL042C	GIN4	Q12263	1142 aa		4.25	□□□□□ -1.73
ATG10	YLL042C	LAS17	Q12446	633 aa		4.25	□□□□□ -1.73
ATG10	YLL042C	FLR1	P38124	548 aa		4.24	□□□□□ -1.73
ATG10	YLL042C	HSL7	P38274	827 aa		4.24	□□□□□ -1.73
ATG10	YLL042C	YEN1	P40028	759 aa		4.24	□□□□□ -1.73
ATG10	YLL042C	PMT3	P47190	753 aa		4.24	□□□□□ -1.73
ATG10	YLL042C	NPY1	P53164	384 aa		4.24	□□□□□ -1.73
ATG10	YLL042C	UME1	Q03010	460 aa		4.24	□□□□□ -1.73
ATG10	YLL042C	MTQ2	Q03920	221 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG10	YLL042C	GUD1	Q07729	489 aa		4.24	□□□□□ -1.73
ATG10	YLL042C	NUP145	P49687	1317 aa		4.23	□□□□□ -1.73
ATG10	YLL042C	STE11	P23561	717 aa		4.23	□□□□□ -1.73
ATG10	YLL042C	TYS1	P36421	394 aa	Known RBP	4.23	□□□□□ -1.73
ATG10	YLL042C	SAK1	P38990	1142 aa		4.23	□□□□□ -1.73
ATG10	YLL042C	VHR1	P40522	640 aa		4.23	□□□□□ -1.73
ATG10	YLL042C	PFA3	P42836	336 aa		4.23	□□□□□ -1.73
ATG10	YLL042C	ERG5	P54781	538 aa		4.23	□□□□□ -1.73
ATG10	YLL042C	CLU1	Q03690	1277 aa	Known RBP	4.23	□□□□□ -1.73
ATG10	YLL042C	YLR358C	O13565	187 aa		4.22	□□□□□ -1.73
ATG10	YLL042C	YKR018C	P36114	725 aa		4.22	□□□□□ -1.73
ATG10	YLL042C	GPP1	P41277	250 aa	Known RBP	4.22	□□□□□ -1.73
ATG10	YLL042C	YFL052W	P43551	465 aa		4.22	□□□□□ -1.73
ATG10	YLL042C	YGR237C	P50089	785 aa		4.22	□□□□□ -1.73
ATG10	YLL042C	ARP4	P80428	489 aa		4.22	□□□□□ -1.73
ATG10	YLL042C	YLR415C	O13578	112 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	CTS1	P29029	562 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	CKB2	P38930	258 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	PZF1	P39933	429 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	UBP5	P39944	805 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	DOT6	P40059	670 aa	Known RBP	4.21	□□□□□ -1.74
ATG10	YLL042C	BUL1	P48524	976 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	MNN10	P50108	393 aa	Known RBP	4.21	□□□□□ -1.74
ATG10	YLL042C	MCM6	P53091	1017 aa	Known RBP	4.21	□□□□□ -1.74
ATG10	YLL042C	PCL10	P53124	433 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	MRPS35	P53292	345 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	RPN7	Q06103	429 aa	Known RBP	4.21	□□□□□ -1.74
ATG10	YLL042C	PEX19	Q07418	342 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	ENB1	Q08299	606 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	DCS2	Q12123	353 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	SWM1	Q12379	170 aa		4.21	□□□□□ -1.74
ATG10	YLL042C	DCG1	P32460	244 aa		4.2	□□□□□ -1.74
ATG10	YLL042C	PRP19	P32523	503 aa	Known RBP	4.2	□□□□□ -1.74
ATG10	YLL042C	CTF13	P35203	478 aa		4.2	□□□□□ -1.74
ATG10	YLL042C	MNN4	P36044	1178 aa		4.2	□□□□□ -1.74
ATG10	YLL042C	SIC1	P38634	284 aa		4.2	□□□□□ -1.74
ATG10	YLL042C	MIP6	P38760	659 aa	Known RBP	4.2	□□□□□ -1.74
ATG10	YLL042C	LEE1	Q02799	301 aa	Known RBP	4.2	□□□□□ -1.74
ATG10	YLL042C	PMA1	P05030	918 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms