RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	RAD18	P10862	487 aa		4.11	□□□□□ -1.75
VHR1	YIL056W	URN1	Q06525	465 aa	Known RBP	4.11	□□□□□ -1.75
VHR1	YIL056W	CDC9	P04819	755 aa		4.11	□□□□□ -1.75
VHR1	YIL056W	KAR4	P25583	335 aa		4.11	□□□□□ -1.75
VHR1	YIL056W	CTF8	P38877	133 aa		4.11	□□□□□ -1.75
VHR1	YIL056W	MNN1	P39106	762 aa		4.11	□□□□□ -1.75
VHR1	YIL056W	TAF1	P46677	1066 aa		4.11	□□□□□ -1.75
VHR1	YIL056W	NPY1	P53164	384 aa		4.11	□□□□□ -1.75
VHR1	YIL056W	NTG2	Q08214	380 aa		4.11	□□□□□ -1.75
VHR1	YIL056W	MDM12	Q92328	271 aa		4.11	□□□□□ -1.75
VHR1	YIL056W	VHR1	P40522	640 aa		4.1	□□□□□ -1.75
VHR1	YIL056W	GUP2	Q08929	609 aa		4.1	□□□□□ -1.75
VHR1	YIL056W	YBP2	P53169	641 aa		4.09	□□□□□ -1.75
VHR1	YIL056W	TFB2	Q02939	513 aa		4.09	□□□□□ -1.75
VHR1	YIL056W	UTP14	Q04500	899 aa	Known RBP	4.09	□□□□□ -1.75
VHR1	YIL056W	TUB2	P02557	457 aa	Known RBP	4.09	□□□□□ -1.76
VHR1	YIL056W	MEF1	P25039	761 aa		4.09	□□□□□ -1.76
VHR1	YIL056W	YCR015C	P25616	317 aa		4.09	□□□□□ -1.76
VHR1	YIL056W	SEC21	P32074	935 aa	Known RBP	4.09	□□□□□ -1.76
VHR1	YIL056W	STE14	P32584	239 aa		4.09	□□□□□ -1.76
VHR1	YIL056W	MTC2	P34246	357 aa		4.09	□□□□□ -1.76
VHR1	YIL056W	MSS4	P38994	779 aa		4.09	□□□□□ -1.76
VHR1	YIL056W	PHO23	P50947	330 aa		4.09	□□□□□ -1.76
VHR1	YIL056W	EXG2	P52911	562 aa		4.09	□□□□□ -1.76
VHR1	YIL056W	MAL11	P53048	616 aa		4.09	□□□□□ -1.76
VHR1	YIL056W	YBR182C-A	Q8TGU6	64 aa		4.09	□□□□□ -1.76
VHR1	YIL056W	SRD1	P09007	221 aa		4.08	□□□□□ -1.76
VHR1	YIL056W	TRM2	P33753	639 aa		4.08	□□□□□ -1.76
VHR1	YIL056W	SNP1	Q00916	300 aa	Predicted RBP	4.08	□□□□□ -1.76
VHR1	YIL056W	ENB1	Q08299	606 aa		4.08	□□□□□ -1.76
VHR1	YIL056W	FBP1	P09201	348 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	CAF16	P43569	289 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	HLJ1	P48353	224 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	ZIP2	P53061	704 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	ORC4	P54791	529 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	NHX1	Q04121	633 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	TRM11	Q12463	433 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	YGR161W-C	Q3E744	92 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	NOP14	Q99207	810 aa	Known RBP	4.07	□□□□□ -1.76
VHR1	YIL056W	MET3	P08536	511 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	HRR25	P29295	494 aa	Known RBP	4.07	□□□□□ -1.76
VHR1	YIL056W	DCG1	P32460	244 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	MCD4	P36051	919 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	BRN1	P38170	754 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	RPP1	P38786	293 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	NTO1	Q12311	748 aa		4.07	□□□□□ -1.76
VHR1	YIL056W	PMA1	P05030	918 aa	Known RBP	4.06	□□□□□ -1.76
VHR1	YIL056W	HOG1	P32485	435 aa		4.06	□□□□□ -1.76
VHR1	YIL056W	HSL7	P38274	827 aa		4.06	□□□□□ -1.76
VHR1	YIL056W	FPR3	P38911	411 aa	Known RBP	4.06	□□□□□ -1.76
VHR1	YIL056W	SDA1	P53313	767 aa	Known RBP	4.06	□□□□□ -1.76
VHR1	YIL056W	NRG1	Q03125	231 aa		4.06	□□□□□ -1.76
VHR1	YIL056W	MUS81	Q04149	632 aa	Predicted RBP	4.06	□□□□□ -1.76
VHR1	YIL056W	ADR1	P07248	1323 aa		4.06	□□□□□ -1.76
VHR1	YIL056W	FKH2	P41813	862 aa		4.05	□□□□□ -1.76
VHR1	YIL056W	ASI2	P53895	289 aa		4.05	□□□□□ -1.76
VHR1	YIL056W	RPN7	Q06103	429 aa	Known RBP	4.05	□□□□□ -1.76
VHR1	YIL056W	THI21	Q08975	551 aa		4.05	□□□□□ -1.76
VHR1	YIL056W	EFT1	P32324	842 aa	Known RBP	4.05	□□□□□ -1.76
VHR1	YIL056W	SUL1	P38359	859 aa		4.05	□□□□□ -1.76
VHR1	YIL056W	AIM21	P40563	679 aa		4.05	□□□□□ -1.76
VHR1	YIL056W	PFA3	P42836	336 aa		4.05	□□□□□ -1.76
VHR1	YIL056W	TY4A-J	P47023	414 aa		4.05	□□□□□ -1.76
VHR1	YIL056W	BFA1	P47113	574 aa		4.05	□□□□□ -1.76
VHR1	YIL056W	YLR415C	O13578	112 aa		4.04	□□□□□ -1.76
VHR1	YIL056W	PMI40	P29952	429 aa	Known RBP	4.04	□□□□□ -1.76
VHR1	YIL056W	CTF13	P35203	478 aa		4.04	□□□□□ -1.76
VHR1	YIL056W	YNL193W	P53870	558 aa		4.04	□□□□□ -1.76
VHR1	YIL056W	DLT1	Q04216	342 aa		4.04	□□□□□ -1.76
VHR1	YIL056W	CAF20	P12962	161 aa	Known RBP	4.03	□□□□□ -1.76
VHR1	YIL056W	HXT16	P47185	567 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	UBC9	P50623	157 aa	Predicted RBP	4.03	□□□□□ -1.76
VHR1	YIL056W	AIM14	P53109	570 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	DNM1	P54861	757 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	GSF2	Q04697	403 aa	Known RBP	4.03	□□□□□ -1.76
VHR1	YIL056W	GUD1	Q07729	489 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	GIN4	Q12263	1142 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	TUB3	P09734	445 aa	Known RBP	4.03	□□□□□ -1.76
VHR1	YIL056W	SFL1	P20134	766 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	YEL1	P34225	687 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	APT2	P36973	181 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	BNA2	P47125	453 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	MSE1	P48525	536 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	COG8	Q04632	607 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	YDR338C	Q05497	695 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	Q0142	Q9ZZW4	58 aa		4.03	□□□□□ -1.76
VHR1	YIL056W	ERG4	P25340	473 aa		4.02	□□□□□ -1.77
VHR1	YIL056W	KTR4	P38131	464 aa		4.02	□□□□□ -1.77
VHR1	YIL056W	TRP4	P07285	380 aa	Predicted RBP	4.01	□□□□□ -1.77
VHR1	YIL056W	RPL8A	P17076	256 aa	Known RBP	4.01	□□□□□ -1.77
VHR1	YIL056W	DEF1	P35732	738 aa	Known RBP	4.01	□□□□□ -1.77
VHR1	YIL056W	YKR051W	P36142	418 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	YBR259W	P38338	688 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	PRP31	P49704	494 aa	Predicted RBP	4.01	□□□□□ -1.77
VHR1	YIL056W	GAD1	Q04792	585 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	NUP145	P49687	1317 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	YKR075C	P36155	307 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	ELO3	P40319	345 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	MUP1	P50276	574 aa		4.01	□□□□□ -1.77
VHR1	YIL056W	SUN4	P53616	420 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms