RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W SKG6P32900 734 aaPredicted RBP12.19□□□□□ -0.46
SNF6YHL025W VID24P38263 362 aa12.19□□□□□ -0.46
SNF6YHL025W EFM4P40516 257 aa12.19□□□□□ -0.46
SNF6YHL025W HXT8P40886 569 aa12.19□□□□□ -0.46
SNF6YHL025W RPA49Q01080 415 aaPredicted RBP12.19□□□□□ -0.46
SNF6YHL025W UBP3Q01477 912 aaKnown RBP RIP-Chip data12.19□□□□□ -0.46not detected
SNF6YHL025W TRS130Q03660 1102 aa12.19□□□□□ -0.46
SNF6YHL025W TSR1Q07381 788 aaKnown RBP12.19□□□□□ -0.46
SNF6YHL025W SLX4Q12098 748 aa12.19□□□□□ -0.46
SNF6YHL025W TOM70P07213 617 aaKnown RBP12.18□□□□□ -0.46
SNF6YHL025W NAT1P12945 854 aaKnown RBP12.18□□□□□ -0.46
SNF6YHL025W PET123P17558 318 aa12.18□□□□□ -0.46
SNF6YHL025W MMS4P38257 691 aa12.18□□□□□ -0.46
SNF6YHL025W FTR1P40088 404 aa12.18□□□□□ -0.46
SNF6YHL025W SEC9P40357 651 aa12.18□□□□□ -0.46
SNF6YHL025W MMM1P41800 426 aa12.18□□□□□ -0.46
SNF6YHL025W RAD57P25301 460 aa12.17□□□□□ -0.46
SNF6YHL025W SWI3P32591 825 aa12.17□□□□□ -0.46
SNF6YHL025W JNM1P36224 373 aa12.17□□□□□ -0.46
SNF6YHL025W MRX3P38172 270 aa12.17□□□□□ -0.46
SNF6YHL025W TPO2P53283 614 aa12.17□□□□□ -0.46
SNF6YHL025W DAS2Q12084 232 aa12.17□□□□□ -0.46
SNF6YHL025W HXT1P32465 570 aa12.16□□□□□ -0.46
SNF6YHL025W SAD1P43589 448 aa12.16□□□□□ -0.46
SNF6YHL025W YML082WQ04533 649 aaKnown RBP12.16□□□□□ -0.46
SNF6YHL025W GIS3Q12418 502 aa12.16□□□□□ -0.46
SNF6YHL025W TRP2P00899 507 aaKnown RBP12.15□□□□□ -0.46
SNF6YHL025W SNF1P06782 633 aaKnown RBP12.15□□□□□ -0.46
SNF6YHL025W SRB4P32569 687 aa12.15□□□□□ -0.46
SNF6YHL025W DUR3P33413 735 aa12.15□□□□□ -0.46
SNF6YHL025W FOL2P51601 243 aaKnown RBP12.15□□□□□ -0.46
SNF6YHL025W TBF1Q02457 562 aa12.15□□□□□ -0.46
SNF6YHL025W HOS3Q02959 697 aaKnown RBP12.15□□□□□ -0.46
SNF6YHL025W RGA2Q06407 1009 aa12.15□□□□□ -0.46
SNF6YHL025W IWR1Q07532 353 aaPredicted RBP12.15□□□□□ -0.46
SNF6YHL025W SHS1Q07657 551 aa12.15□□□□□ -0.46
SNF6YHL025W PET111P08468 800 aa12.14□□□□□ -0.47
SNF6YHL025W KIC1P38692 1080 aa12.14□□□□□ -0.47
SNF6YHL025W DAS1P47005 663 aa12.14□□□□□ -0.47
SNF6YHL025W CPR7P47103 393 aa12.14□□□□□ -0.47
SNF6YHL025W SOV1Q04748 898 aa12.14□□□□□ -0.47
SNF6YHL025W VAC14Q06708 880 aa12.14□□□□□ -0.47
SNF6YHL025W UBR2Q07963 1872 aa12.14□□□□□ -0.47
SNF6YHL025W CDC33P07260 213 aaKnown RBP12.13□□□□□ -0.47
SNF6YHL025W CKI1P20485 582 aa12.13□□□□□ -0.47
SNF6YHL025W POT1P27796 417 aaKnown RBP RIP-Chip data12.13□□□□□ -0.47not detected
SNF6YHL025W YMR124WP39523 943 aaKnown RBP12.13□□□□□ -0.47
SNF6YHL025W ALD5P40047 520 aaKnown RBP12.13□□□□□ -0.47
SNF6YHL025W VPS70P47161 811 aa12.13□□□□□ -0.47
SNF6YHL025W YGR021WP53212 290 aa12.13□□□□□ -0.47
SNF6YHL025W BOP3P53958 396 aa12.13□□□□□ -0.47
SNF6YHL025W VPS72Q03388 795 aa12.13□□□□□ -0.47
SNF6YHL025W VPS60Q03390 229 aa12.13□□□□□ -0.47
SNF6YHL025W SML1Q04964 104 aa12.13□□□□□ -0.47
SNF6YHL025W SGT2Q12118 346 aaKnown RBP12.13□□□□□ -0.47
SNF6YHL025W ZPS1Q12512 249 aa12.13□□□□□ -0.47
SNF6YHL025W CDC42P19073 191 aa12.12□□□□□ -0.47
SNF6YHL025W IME1P21190 360 aa12.12□□□□□ -0.47
SNF6YHL025W SEC21P32074 935 aaKnown RBP12.12□□□□□ -0.47
SNF6YHL025W BUD2P33314 1104 aa12.12□□□□□ -0.47
SNF6YHL025W TRZ1P36159 838 aaPredicted RBP12.12□□□□□ -0.47
SNF6YHL025W TCD1P38756 429 aa12.12□□□□□ -0.47
SNF6YHL025W SET5P38890 526 aaKnown RBP12.12□□□□□ -0.47
SNF6YHL025W NDC80P40460 691 aa12.12□□□□□ -0.47
SNF6YHL025W CEP3P40969 608 aa12.12□□□□□ -0.47
SNF6YHL025W AZR1P50080 613 aa12.12□□□□□ -0.47
SNF6YHL025W SYH1Q02875 849 aaKnown RBP12.12□□□□□ -0.47
SNF6YHL025W STE20Q03497 939 aaKnown RBP12.12□□□□□ -0.47
SNF6YHL025W PPM1Q04081 328 aa12.12□□□□□ -0.47
SNF6YHL025W MCM16Q12262 181 aa12.12□□□□□ -0.47
SNF6YHL025W COX4P04037 155 aa12.11□□□□□ -0.47
SNF6YHL025W ASP3-2P0CX77 362 aa12.11□□□□□ -0.47
SNF6YHL025W ASP3-3P0CX78 362 aa12.11□□□□□ -0.47
SNF6YHL025W ASP3-4P0CX79 362 aa12.11□□□□□ -0.47
SNF6YHL025W ASP3-1P0CZ17 362 aa12.11□□□□□ -0.47
SNF6YHL025W GLN3P18494 730 aa12.11□□□□□ -0.47
SNF6YHL025W COX11P19516 300 aaKnown RBP12.11□□□□□ -0.47
SNF6YHL025W ADE2P21264 571 aaKnown RBP12.11□□□□□ -0.47
SNF6YHL025W CDC11P32458 415 aa12.11□□□□□ -0.47
SNF6YHL025W TRM2P33753 639 aa12.11□□□□□ -0.47
SNF6YHL025W JHD1P40034 492 aa12.11□□□□□ -0.47
SNF6YHL025W CEF1Q03654 590 aaPredicted RBP12.11□□□□□ -0.47
SNF6YHL025W DOT1Q04089 582 aaKnown RBP12.11□□□□□ -0.47
SNF6YHL025W MOT1P32333 1867 aa12.1□□□□□ -0.47
SNF6YHL025W DAL2P25335 343 aa12.1□□□□□ -0.47
SNF6YHL025W CBF2P32504 956 aa12.1□□□□□ -0.47
SNF6YHL025W RPT1P33299 467 aaKnown RBP12.1□□□□□ -0.47
SNF6YHL025W CSG2P35206 410 aa12.1□□□□□ -0.47
SNF6YHL025W YAP1801P38856 637 aa12.1□□□□□ -0.47
SNF6YHL025W BUD16P39988 312 aa12.1□□□□□ -0.47
SNF6YHL025W RSC8P43609 557 aaKnown RBP12.1□□□□□ -0.47
SNF6YHL025W ISM1P48526 1002 aa12.1□□□□□ -0.47
SNF6YHL025W MUK1Q02866 612 aa12.1□□□□□ -0.47
SNF6YHL025W NGL3Q03210 505 aa12.1□□□□□ -0.47
SNF6YHL025W YLR001CQ07895 862 aa12.1□□□□□ -0.47
SNF6YHL025W RPL4AP10664 362 aaKnown RBP12.09□□□□□ -0.47
SNF6YHL025W STE11P23561 717 aa12.09□□□□□ -0.47
SNF6YHL025W SCJ1P25303 377 aa12.09□□□□□ -0.47
SNF6YHL025W YEL043WP32618 956 aa12.09□□□□□ -0.47
SNF6YHL025W YKL050CP35736 922 aa12.09□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms