RNA–Protein interactions for RNA: YFL007W

BLM10, Transcript of Proteasome activator, yeast

Gene BLM10, Length 6,432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLM10	YFL007W	NUP85	P46673	744 aa		4.91	□□□□□ -1.62
BLM10	YFL007W	ARO80	Q04052	950 aa		4.91	□□□□□ -1.62
BLM10	YFL007W	REH1	Q06709	432 aa		4.91	□□□□□ -1.62
BLM10	YFL007W	YDL144C	Q07589	356 aa		4.91	□□□□□ -1.62
BLM10	YFL007W	RUP1	Q12242	671 aa		4.91	□□□□□ -1.62
BLM10	YFL007W	HCM1	P25364	564 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	PAT1	P25644	796 aa	Known RBP	4.9	□□□□□ -1.62
BLM10	YFL007W	GCD11	P32481	527 aa	Known RBP	4.9	□□□□□ -1.62
BLM10	YFL007W	CSE1	P33307	960 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	OSH7	P38755	437 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	YGL140C	P53120	1219 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	PEX8	P53248	589 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	CWC27	Q02770	301 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	MUK1	Q02866	612 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	RTT103	Q05543	409 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	CSR1	Q06705	408 aa	Known RBP	4.9	□□□□□ -1.62
BLM10	YFL007W	RSA1	Q08932	381 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	PDX1	P16451	410 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	RPL8A	P17076	256 aa	Known RBP	4.9	□□□□□ -1.62
BLM10	YFL007W	CMK1	P27466	446 aa	Known RBP	4.9	□□□□□ -1.62
BLM10	YFL007W	RPL8B	P29453	256 aa	Known RBP	4.9	□□□□□ -1.62
BLM10	YFL007W	STP2	P38704	541 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	GIP4	P39732	760 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	SSP120	P39931	234 aa	Known RBP	4.9	□□□□□ -1.62
BLM10	YFL007W	SIT1	P39980	628 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	SAP155	P43612	1002 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	YJR141W	P47172	347 aa	Predicted RBP	4.9	□□□□□ -1.62
BLM10	YFL007W	YNR068C	P53754	272 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	CUE5	Q08412	411 aa	Known RBP	4.9	□□□□□ -1.62
BLM10	YFL007W	ATG29	Q12092	213 aa		4.9	□□□□□ -1.62
BLM10	YFL007W	TRL1	P09880	827 aa	Known RBP	4.9	□□□□□ -1.63
BLM10	YFL007W	ASF2	P32448	525 aa	Predicted RBP	4.9	□□□□□ -1.63
BLM10	YFL007W	JLP2	P40206	208 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	CEP3	P40969	608 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	UPF3	P48412	387 aa	Known RBP	4.9	□□□□□ -1.63
BLM10	YFL007W	COS6	P53344	381 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	BRE5	P53741	515 aa	Known RBP	4.9	□□□□□ -1.63
BLM10	YFL007W	GNT1	Q12096	491 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	FAL1	Q12099	399 aa	Known RBP	4.9	□□□□□ -1.63
BLM10	YFL007W	SRN2	Q99176	213 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	RAD54	P32863	898 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	PAN5	P38787	379 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	FHL1	P39521	936 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	PSY2	P40164	858 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	INP51	P40559	946 aa	Known RBP	4.9	□□□□□ -1.63
BLM10	YFL007W	HUL4	P40985	892 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	ALD4	P46367	519 aa	Known RBP	4.9	□□□□□ -1.63
BLM10	YFL007W	SHE9	Q04172	456 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	CLB2	P24869	491 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	SAC6	P32599	642 aa	Known RBP	4.9	□□□□□ -1.63
BLM10	YFL007W	PPG1	P32838	368 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	MAK5	P38112	773 aa	Predicted RBP	4.9	□□□□□ -1.63
BLM10	YFL007W	SER3	P40054	469 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	SCC4	P40090	624 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
BLM10	YFL007W	NSE5	Q03718	556 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	RCO1	Q04779	684 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	MLC2	Q06580	163 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
BLM10	YFL007W	AHC1	Q12433	566 aa		4.9	□□□□□ -1.63
BLM10	YFL007W	SNF1	P06782	633 aa	Known RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	KAR9	P32526	644 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	SRP72	P38688	640 aa	Known RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	KIC1	P38692	1080 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	BCD1	P38772	366 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	MNT3	P40549	630 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	SYF1	Q04048	859 aa	Predicted RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	YOR378W	Q08902	515 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	VPS54	Q12071	889 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	PET18	P25362	215 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	OCA4	P25366	362 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	TRM5	P38793	499 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	CTM1	P38818	585 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	BOP3	P53958	396 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	ARO10	Q06408	635 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	DPB2	P24482	689 aa	Predicted RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	TTI1	P36097	1038 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	RFC3	P38629	340 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	NUP157	P40064	1391 aa	Known RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	RPP2A	P05319	106 aa	Known RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	RER1	P25560	188 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	PLC1	P32383	869 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	RTG2	P32608	588 aa	Known RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	CYM1	P32898	989 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	GET1	P53192	235 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	BCP1	Q06338	283 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	GAL4	P04386	881 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	PMA1	P05030	918 aa	Known RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	RPS7A	P26786	190 aa	Known RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	YIL092W	P40497	633 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	REF2	P42073	533 aa	Predicted RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	CIT3	P43635	486 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	ISM1	P48526	1002 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	UBP15	P50101	1230 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	HCR1	Q05775	265 aa	Known RBP	4.89	□□□□□ -1.63
BLM10	YFL007W	PUS9	Q12069	462 aa		4.89	□□□□□ -1.63
BLM10	YFL007W	CYC8	P14922	966 aa		4.88	□□□□□ -1.63
BLM10	YFL007W	SRO9	P25567	434 aa	Known RBP	4.88	□□□□□ -1.63
BLM10	YFL007W	HXT5	P38695	592 aa		4.88	□□□□□ -1.63
BLM10	YFL007W	DLD2	P46681	530 aa	Known RBP	4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms