RNA–Protein interactions for RNA: ENST00000637340.1

EFHC1-232, Transcript of EF-hand domain containing 1, humanhuman

TSL 1 (best)

Gene EFHC1, Length 4,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-232ENST00000637340 DEF6Q9H4E7 631 aa12.86□□□□□ -0.35
EFHC1-232ENST00000637340 SLC27A2O14975 620 aa12.86□□□□□ -0.35
EFHC1-232ENST00000637340 SMC1AQ14683 1233 aaKnown RBP12.86□□□□□ -0.35
EFHC1-232ENST00000637340 TTC37Q6PGP7 1564 aa12.86□□□□□ -0.35
EFHC1-232ENST00000637340 SEC62Q99442 399 aaKnown RBP12.85□□□□□ -0.35
EFHC1-232ENST00000637340 HINFPQ9BQA5 517 aa12.85□□□□□ -0.35
EFHC1-232ENST00000637340 TSPYL1Q9H0U9 437 aa12.85□□□□□ -0.35
EFHC1-232ENST00000637340 MYO5CQ9NQX4 1742 aa12.85□□□□□ -0.35
EFHC1-232ENST00000637340 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.85□□□□□ -0.35
EFHC1-232ENST00000637340 TDRD7Q8NHU6 1098 aaKnown RBP12.85□□□□□ -0.35
EFHC1-232ENST00000637340 PGBD1Q96JS3 809 aa12.85□□□□□ -0.35
EFHC1-232ENST00000637340 OSBPL3Q9H4L5 887 aa12.85□□□□□ -0.35
EFHC1-232ENST00000637340 PTCH1Q13635 1447 aa12.85□□□□□ -0.35
EFHC1-232ENST00000637340 PATL2C9JE40 543 aaKnown RBP12.85□□□□□ -0.35
EFHC1-232ENST00000637340 RBM6P78332 1123 aaKnown RBP12.85□□□□□ -0.35
EFHC1-232ENST00000637340 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
EFHC1-232ENST00000637340 USP28Q96RU2 1077 aa12.85□□□□□ -0.35
EFHC1-232ENST00000637340 DESI2Q9BSY9 194 aa12.85□□□□□ -0.35
EFHC1-232ENST00000637340 RPGRIP1LQ68CZ1 1315 aa12.85□□□□□ -0.35
EFHC1-232ENST00000637340 PIP4K2AP48426 406 aaPredicted RBP12.85□□□□□ -0.35
EFHC1-232ENST00000637340 CROCC2H7BZ55 1655 aa12.84□□□□□ -0.35
EFHC1-232ENST00000637340 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
EFHC1-232ENST00000637340 FKBP15Q5T1M5 1219 aa12.84□□□□□ -0.35
EFHC1-232ENST00000637340 CCDC85AQ96PX6 553 aaPredicted RBP12.84□□□□□ -0.35
EFHC1-232ENST00000637340 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
EFHC1-232ENST00000637340 E2F4Q16254 413 aa12.84□□□□□ -0.35
EFHC1-232ENST00000637340 SMARCE1Q969G3 411 aa12.84□□□□□ -0.35
EFHC1-232ENST00000637340 A0A0D9SFI3 127 aa12.84□□□□□ -0.35
EFHC1-232ENST00000637340 CTAGE5O15320 804 aa12.84□□□□□ -0.35
EFHC1-232ENST00000637340 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
EFHC1-232ENST00000637340 PPP1R13BQ96KQ4 1090 aa12.84□□□□□ -0.35
EFHC1-232ENST00000637340 MADDQ8WXG6 1647 aa12.83□□□□□ -0.35
EFHC1-232ENST00000637340 MRPS27Q92552 414 aaKnown RBP12.83□□□□□ -0.36
EFHC1-232ENST00000637340 CENPHQ9H3R5 247 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 PTPDC1A2A3K4 754 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 NFXL1Q6ZNB6 911 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 CCDC150Q8NCX0 1101 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 RAI14Q9P0K7 980 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 CCP110O43303 1012 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 PPP2R3AQ06190 1150 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 NEXNQ0ZGT2 675 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 DPCR1Q3MIW9 517 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 MICALL1Q8N3F8 863 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 C8orf76Q96K31 380 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 MAP3K2Q9Y2U5 619 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 PLCH2O75038 1416 aa12.83□□□□□ -0.36
EFHC1-232ENST00000637340 WASLO00401 505 aaPredicted RBP12.82□□□□□ -0.36
EFHC1-232ENST00000637340 ZSCAN12O43309 604 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 DNAJC21Q5F1R6 531 aaKnown RBP12.82□□□□□ -0.36
EFHC1-232ENST00000637340 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 RALYLQ86SE5 291 aaKnown RBP12.82□□□□□ -0.36
EFHC1-232ENST00000637340 TAF6LQ9Y6J9 622 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 HIP1O00291 1037 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 HSP90AB3PQ58FF7 597 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 TTC14Q96N46 770 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 FUCA2Q9BTY2 467 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 FKBP4Q02790 459 aaKnown RBP eCLIP12.82□□□□□ -0.36
EFHC1-232ENST00000637340 LONRF3Q496Y0 759 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 SPECC1Q5M775 1068 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 PLA2G4DQ86XP0 818 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 CAGE1Q8TC20 777 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 NOC3LQ8WTT2 800 aaKnown RBP12.82□□□□□ -0.36
EFHC1-232ENST00000637340 SNRKQ9NRH2 765 aa12.82□□□□□ -0.36
EFHC1-232ENST00000637340 RXRAP19793 462 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 WWC2Q6AWC2 1192 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 EIF3JO75822 258 aaKnown RBP12.81□□□□□ -0.36
EFHC1-232ENST00000637340 ATP1A3P13637 1013 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 ADKP55263 362 aaKnown RBP12.81□□□□□ -0.36
EFHC1-232ENST00000637340 ETF1P62495 437 aaKnown RBP12.81□□□□□ -0.36
EFHC1-232ENST00000637340 FANCCQ00597 558 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 DHX8Q14562 1220 aaKnown RBP12.81□□□□□ -0.36
EFHC1-232ENST00000637340 RASSF8Q8NHQ8 419 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 ZSWIM6Q9HCJ5 1215 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 ARHGEF5Q12774 1597 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 MNAT1P51948 309 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 COL9A3Q14050 684 aaPredicted RBP12.81□□□□□ -0.36
EFHC1-232ENST00000637340 TRIM29Q14134 588 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
EFHC1-232ENST00000637340 ERC1Q8IUD2 1116 aa12.81□□□□□ -0.36
EFHC1-232ENST00000637340 TTC31Q49AM3 519 aaPredicted RBP12.8□□□□□ -0.36
EFHC1-232ENST00000637340 PPFIBP1Q86W92 1011 aa12.8□□□□□ -0.36
EFHC1-232ENST00000637340 SLC26A8Q96RN1 970 aa12.8□□□□□ -0.36
EFHC1-232ENST00000637340 ADGRL1O94910 1474 aa12.8□□□□□ -0.36
EFHC1-232ENST00000637340 SBNO2Q9Y2G9 1366 aa12.8□□□□□ -0.36
EFHC1-232ENST00000637340 MYO1CO00159 1063 aa12.8□□□□□ -0.36
EFHC1-232ENST00000637340 ERLIN1O75477 346 aa12.8□□□□□ -0.36
EFHC1-232ENST00000637340 FAM160A1Q05DH4 1040 aa12.8□□□□□ -0.36
EFHC1-232ENST00000637340 CLTCL1P53675 1640 aa12.8□□□□□ -0.36
EFHC1-232ENST00000637340 ATP10DQ9P241 1426 aa12.8□□□□□ -0.36
EFHC1-232ENST00000637340 GOLIM4O00461 696 aa12.8□□□□□ -0.36
EFHC1-232ENST00000637340 SART3Q15020 963 aaKnown RBP12.8□□□□□ -0.36
EFHC1-232ENST00000637340 PCMTD1Q96MG8 357 aaPredicted RBP12.8□□□□□ -0.36
EFHC1-232ENST00000637340 ORC3Q9UBD5 711 aaPredicted RBP12.8□□□□□ -0.36
EFHC1-232ENST00000637340 CHGBP05060 677 aa12.79□□□□□ -0.36
EFHC1-232ENST00000637340 TPM1P09493 284 aa12.79□□□□□ -0.36
EFHC1-232ENST00000637340 STX17P56962 302 aa12.79□□□□□ -0.36
EFHC1-232ENST00000637340 ZSCAN16Q9H4T2 348 aaPredicted RBP12.79□□□□□ -0.36
EFHC1-232ENST00000637340 TLR7Q9NYK1 1049 aaKnown RBP12.79□□□□□ -0.36
EFHC1-232ENST00000637340 MTX1Q13505 466 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms