RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 KRT26Q7Z3Y9 468 aa24.27■■□□□ 1.48
CLN6-212ENST00000636020 MICALL2Q8IY33 904 aa24.27■■□□□ 1.48
CLN6-212ENST00000636020 HPS5Q9UPZ3 1129 aa24.27■■□□□ 1.48
CLN6-212ENST00000636020 AKAP11Q9UKA4 1901 aa24.27■■□□□ 1.48
CLN6-212ENST00000636020 YDJCA8MPS7 323 aa24.26■■□□□ 1.47
CLN6-212ENST00000636020 DCTN1Q14203 1278 aa24.26■■□□□ 1.47
CLN6-212ENST00000636020 KIF6Q6ZMV9 814 aa24.26■■□□□ 1.47
CLN6-212ENST00000636020 MPNDQ8N594 471 aa24.26■■□□□ 1.47
CLN6-212ENST00000636020 ABCC4O15439 1325 aa24.26■■□□□ 1.47
CLN6-212ENST00000636020 SAMD7Q7Z3H4 446 aa24.25■■□□□ 1.47
CLN6-212ENST00000636020 SP8Q8IXZ3 490 aa24.25■■□□□ 1.47
CLN6-212ENST00000636020 DPF2Q92785 391 aa24.25■■□□□ 1.47
CLN6-212ENST00000636020 ZBTB3Q9H5J0 574 aa24.25■■□□□ 1.47
CLN6-212ENST00000636020 RRP7AQ9Y3A4 280 aaKnown RBP24.25■■□□□ 1.47
CLN6-212ENST00000636020 POLR2AP24928 1970 aaKnown RBP24.24■■□□□ 1.47
CLN6-212ENST00000636020 BBOX1O75936 387 aa24.24■■□□□ 1.47
CLN6-212ENST00000636020 SLC10A3P09131 477 aa24.24■■□□□ 1.47
CLN6-212ENST00000636020 TAF7Q15545 349 aaPredicted RBP24.24■■□□□ 1.47
CLN6-212ENST00000636020 SLC10A5Q5PT55 438 aa24.24■■□□□ 1.47
CLN6-212ENST00000636020 PPP1R42Q7Z4L9 355 aa24.23■■□□□ 1.47
CLN6-212ENST00000636020 GCC1Q96CN9 775 aa24.23■■□□□ 1.47
CLN6-212ENST00000636020 MIS18AQ9NYP9 233 aa24.23■■□□□ 1.47
CLN6-212ENST00000636020 ZBTB12Q9Y330 459 aaPredicted RBP24.23■■□□□ 1.47
CLN6-212ENST00000636020 LAMB4A4D0S4 1761 aa24.23■■□□□ 1.47
CLN6-212ENST00000636020 MKI67P46013 3256 aaKnown RBP24.23■■□□□ 1.47
CLN6-212ENST00000636020 HTATSF1O43719 755 aaKnown RBP24.22■■□□□ 1.47
CLN6-212ENST00000636020 GIGYF2Q6Y7W6 1299 aaKnown RBP24.22■■□□□ 1.47
CLN6-212ENST00000636020 ADM5C9JUS6 153 aa24.21■■□□□ 1.47
CLN6-212ENST00000636020 EGFRP00533 1210 aa24.21■■□□□ 1.47
CLN6-212ENST00000636020 PKN2Q16513 984 aaKnown RBP24.21■■□□□ 1.47
CLN6-212ENST00000636020 TBC1D10BQ4KMP7 808 aaPredicted RBP24.21■■□□□ 1.47
CLN6-212ENST00000636020 PARP10Q53GL7 1025 aa24.21■■□□□ 1.47
CLN6-212ENST00000636020 MYL6BP14649 208 aa24.2■■□□□ 1.46
CLN6-212ENST00000636020 REM2Q8IYK8 340 aaPredicted RBP24.2■■□□□ 1.46
CLN6-212ENST00000636020 DCPSQ96C86 337 aaKnown RBP24.2■■□□□ 1.46
CLN6-212ENST00000636020 PSMD14O00487 310 aa24.18■■□□□ 1.46
CLN6-212ENST00000636020 UTP14AQ9BVJ6 771 aaKnown RBP24.18■■□□□ 1.46
CLN6-212ENST00000636020 HABP4Q5JVS0 413 aaKnown RBP24.16■■□□□ 1.46
CLN6-212ENST00000636020 RBM26Q5T8P6 1007 aaKnown RBP24.16■■□□□ 1.46
CLN6-212ENST00000636020 EIF4A1P60842 406 aaKnown RBP24.15■■□□□ 1.46
CLN6-212ENST00000636020 CNGB1Q14028 1251 aaPredicted RBP24.15■■□□□ 1.46
CLN6-212ENST00000636020 RASAL3Q86YV0 1011 aa24.15■■□□□ 1.46
CLN6-212ENST00000636020 CLSPNQ9HAW4 1339 aa24.14■■□□□ 1.46
CLN6-212ENST00000636020 RPS12P25398 132 aaKnown RBP24.14■■□□□ 1.45
CLN6-212ENST00000636020 GRAPQ13588 217 aa24.14■■□□□ 1.45
CLN6-212ENST00000636020 GRAPLQ8TC17 118 aaPredicted RBP24.14■■□□□ 1.45
CLN6-212ENST00000636020 ZNF296Q8WUU4 475 aaPredicted RBP24.14■■□□□ 1.45
CLN6-212ENST00000636020 DUOX1Q9NRD9 1551 aa24.14■■□□□ 1.45
CLN6-212ENST00000636020 HDAC9Q9UKV0 1011 aa24.14■■□□□ 1.45
CLN6-212ENST00000636020 NUDCQ9Y266 331 aa24.14■■□□□ 1.45
CLN6-212ENST00000636020 DDX46Q7L014 1031 aaKnown RBP24.13■■□□□ 1.45
CLN6-212ENST00000636020 CFAP53Q96M91 514 aa24.13■■□□□ 1.45
CLN6-212ENST00000636020 U2AF1L5P0DN76 240 aaPredicted RBP24.12■■□□□ 1.45
CLN6-212ENST00000636020 U2AF1Q01081 240 aaKnown RBP eCLIP24.12■■□□□ 1.45
CLN6-212ENST00000636020 SULF1Q8IWU6 871 aa24.12■■□□□ 1.45
CLN6-212ENST00000636020 PNISRQ8TF01 805 aaKnown RBP24.12■■□□□ 1.45
CLN6-212ENST00000636020 CDCA5Q96FF9 252 aa24.12■■□□□ 1.45
CLN6-212ENST00000636020 DBNDD1Q9H9R9 158 aa24.12■■□□□ 1.45
CLN6-212ENST00000636020 HCLS1P14317 486 aaPredicted RBP24.11■■□□□ 1.45
CLN6-212ENST00000636020 WASHC4Q2M389 1173 aa24.11■■□□□ 1.45
CLN6-212ENST00000636020 LAMB2P55268 1798 aa24.11■■□□□ 1.45
CLN6-212ENST00000636020 ANKRD36CQ5JPF3 1778 aa24.11■■□□□ 1.45
CLN6-212ENST00000636020 TBC1D8O95759 1140 aa24.1■■□□□ 1.45
CLN6-212ENST00000636020 KIF4BQ2VIQ3 1234 aa24.1■■□□□ 1.45
CLN6-212ENST00000636020 TMC4Q7Z404 712 aa24.1■■□□□ 1.45
CLN6-212ENST00000636020 LRP10Q7Z4F1 713 aa24.1■■□□□ 1.45
CLN6-212ENST00000636020 KCNQ5Q9NR82 932 aa24.1■■□□□ 1.45
CLN6-212ENST00000636020 GGA3Q9NZ52 723 aa24.1■■□□□ 1.45
CLN6-212ENST00000636020 ASTN2O75129 1339 aaPredicted RBP24.1■■□□□ 1.45
CLN6-212ENST00000636020 ERBB4Q15303 1308 aa24.1■■□□□ 1.45
CLN6-212ENST00000636020 KDM3BQ7LBC6 1761 aa24.09■■□□□ 1.45
CLN6-212ENST00000636020 FBXO46Q6PJ61 603 aaPredicted RBP24.09■■□□□ 1.45
CLN6-212ENST00000636020 RTL9Q8NET4 1388 aa24.08■■□□□ 1.45
CLN6-212ENST00000636020 HTTP42858 3142 aa24.08■■□□□ 1.44
CLN6-212ENST00000636020 TAF1P21675 1872 aa24.07■■□□□ 1.44
CLN6-212ENST00000636020 RIMBP2O15034 1052 aa24.07■■□□□ 1.44
CLN6-212ENST00000636020 FKBP1BP68106 108 aa24.07■■□□□ 1.44
CLN6-212ENST00000636020 NOM1Q5C9Z4 860 aaKnown RBP24.07■■□□□ 1.44
CLN6-212ENST00000636020 THUMPD2Q9BTF0 503 aaKnown RBP24.07■■□□□ 1.44
CLN6-212ENST00000636020 ECE2O60344 883 aa24.06■■□□□ 1.44
CLN6-212ENST00000636020 NLRP10Q86W26 655 aa24.06■■□□□ 1.44
CLN6-212ENST00000636020 LRRC37AA6NMS7 1700 aa24.06■■□□□ 1.44
CLN6-212ENST00000636020 GPR25O00155 361 aa24.05■■□□□ 1.44
CLN6-212ENST00000636020 PDIA6Q15084 440 aa24.05■■□□□ 1.44
CLN6-212ENST00000636020 POLLQ9UGP5 575 aa24.05■■□□□ 1.44
CLN6-212ENST00000636020 NSFL1CQ9UNZ2 370 aaKnown RBP24.05■■□□□ 1.44
CLN6-212ENST00000636020 CENPFP49454 3210 aa24.04■■□□□ 1.44
CLN6-212ENST00000636020 VIL1P09327 827 aaKnown RBP24.04■■□□□ 1.44
CLN6-212ENST00000636020 DOK7Q18PE1 504 aa24.04■■□□□ 1.44
CLN6-212ENST00000636020 C6orf229H3BNL8 230 aa24.03■■□□□ 1.44
CLN6-212ENST00000636020 TM4SF4P48230 202 aa24.03■■□□□ 1.44
CLN6-212ENST00000636020 TRMT112Q9UI30 125 aaKnown RBP24.03■■□□□ 1.44
CLN6-212ENST00000636020 PAPPA2Q9BXP8 1791 aa24.02■■□□□ 1.44
CLN6-212ENST00000636020 HSP90AB3PQ58FF7 597 aa24.02■■□□□ 1.44
CLN6-212ENST00000636020 ANGEL2Q5VTE6 544 aaKnown RBP24.02■■□□□ 1.44
CLN6-212ENST00000636020 SH3TC1Q8TE82 1336 aa24.02■■□□□ 1.44
CLN6-212ENST00000636020 SCARF1Q14162 830 aa24.01■■□□□ 1.43
CLN6-212ENST00000636020 PROSER3Q2NL68 480 aa24.01■■□□□ 1.43
CLN6-212ENST00000636020 MOB2Q70IA6 237 aa24.01■■□□□ 1.43
CLN6-212ENST00000636020 FXR1P51114 621 aaKnown RBP eCLIP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms