RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 EFCC1Q9HA90 598 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 KLK14Q9P0G3 267 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 FRRS1LQ9P0K9 344 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 BCS1LQ9Y276 419 aa2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 RBM19Q9Y4C8 960 aaKnown RBP2.74□□□□□ -1.97
SMARCB1-209ENST00000635578 USP17L3A6NCW0 530 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 USP17L4A6NCW7 530 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 TGFBR3LH3BV60 316 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 J3QW42 95 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 ZBTB7BO15156 539 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 GSC2O15499 205 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 DHX15O43143 795 aaKnown RBP2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 LZTS3O60299 673 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 EPB42P16452 691 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 GRNP28799 593 aaKnown RBP2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 GRIK1P39086 918 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 IDH3AP50213 366 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 ATP1A2P50993 1020 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 GPLD1P80108 840 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 RTN1Q16799 776 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 USP17L2Q6R6M4 530 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 POTEAQ6S8J7 498 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 USP17L1Q7RTZ2 530 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 SLC51AQ86UW1 340 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 ZDHHC13Q8IUH4 622 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 TRIM42Q8IWZ5 723 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 OGFOD1Q8N543 542 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 IL22RA1Q8N6P7 574 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 NFATC2IPQ8NCF5 419 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 UTP4Q969X6 686 aaKnown RBP2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 PLD4Q96BZ4 506 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 IFT43Q96FT9 208 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 NSUN5Q96P11 429 aaKnown RBP2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 UBL7Q96S82 380 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 C2orf49Q9BVC5 232 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 KRTAP4-9Q9BYQ8 210 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 USP20Q9Y2K6 914 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 ATAD2Q6PL18 1390 aa2.73□□□□□ -1.97
SMARCB1-209ENST00000635578 HMX2A2RU54 273 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 PALM3A6NDB9 673 aaPredicted RBP2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 WISP1O95388 367 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 WNT11O96014 354 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 SPINK2P20155 84 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 ARID4AP29374 1257 aaPredicted RBP2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 CDC25BP30305 580 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 INPP5BP32019 993 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 JAG1P78504 1218 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 NFIAQ12857 509 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 SETDB1Q15047 1291 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 IER5Q5VY09 327 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 TXNDC11Q6PKC3 985 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 Q6ZS46 218 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 ACAD11Q709F0 780 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 TMEM130Q8N3G9 435 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 TTC9Q92623 222 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 ALG2Q9H553 416 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 C7orf69Q9H7B7 122 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 DMGDHQ9UI17 866 aaKnown RBP2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 TRIM33Q9UPN9 1127 aa2.72□□□□□ -1.97
SMARCB1-209ENST00000635578 GHRHP01286 108 aa2.71□□□□□ -1.98
SMARCB1-209ENST00000635578 ARSDP51689 593 aa2.71□□□□□ -1.98
SMARCB1-209ENST00000635578 NRLP54845 237 aa2.71□□□□□ -1.98
SMARCB1-209ENST00000635578 INTS5Q6P9B9 1019 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-209ENST00000635578 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-209ENST00000635578 ARMC10Q8N2F6 343 aa2.71□□□□□ -1.98
SMARCB1-209ENST00000635578 HINFPQ9BQA5 517 aa2.71□□□□□ -1.98
SMARCB1-209ENST00000635578 DBNDD2Q9BQY9 259 aa2.71□□□□□ -1.98
SMARCB1-209ENST00000635578 MKRN1Q9UHC7 482 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-209ENST00000635578 ADGRE2Q9UHX3 823 aa2.71□□□□□ -1.98
SMARCB1-209ENST00000635578 LOC102724428A0A0B4J2F2 783 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 PRR19A6NJB7 356 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 LINC01387J3KSC0 135 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 M0R2N6 131 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 MICAL2O94851 1124 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 PSAPP07602 524 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 SIK1P57059 783 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 DGKZQ13574 1117 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 MCM6Q14566 821 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 RNF43Q68DV7 783 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 OGFOD2Q6N063 350 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 DTX1Q86Y01 620 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 MAP4K3Q8IVH8 894 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 PLEKHM2Q8IWE5 1019 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 RGL4Q8IZJ4 473 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 ABI1Q8IZP0 508 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 SIX5Q8N196 739 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 STAG2Q8N3U4 1231 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 LARGE2Q8N3Y3 721 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 GALNT11Q8NCW6 608 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 SHKBP1Q8TBC3 707 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 CARD10Q9BWT7 1032 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 CEP41Q9BYV8 373 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 LACRTQ9GZZ8 138 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 RBSNQ9H1K0 784 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 KCNF1Q9H3M0 494 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 KCNK4Q9NYG8 393 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 TLR7Q9NYK1 1049 aaKnown RBP2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 COG6Q9Y2V7 657 aa2.7□□□□□ -1.98
SMARCB1-209ENST00000635578 POM121CA8CG34 1229 aa2.69□□□□□ -1.98
SMARCB1-209ENST00000635578 WDR64B1ANS9 1081 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms