RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 AIMP1Q12904 312 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-221ENST00000625705 STK31Q9BXU1 1019 aa9.3□□□□□ -0.92
NPLOC4-221ENST00000625705 PLA2G2EQ9NZK7 142 aa9.3□□□□□ -0.92
NPLOC4-221ENST00000625705 COL24A1Q17RW2 1714 aa9.3□□□□□ -0.92
NPLOC4-221ENST00000625705 FANCIQ9NVI1 1328 aa9.3□□□□□ -0.92
NPLOC4-221ENST00000625705 NBPF26B4DH59 902 aa9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 ANXA1P04083 346 aa9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 ZNF853P0CG23 659 aa9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 COL9A1P20849 921 aa9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 HNRNPUQ00839 825 aaKnown RBP eCLIP9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 TWISTNBQ3B726 338 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 CCDC30Q5VVM6 783 aa9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 NBPF10Q6P3W6 841 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 NBPF15Q8N660 670 aa9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 FBXW7Q969H0 707 aa9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 ZBTB3Q9H5J0 574 aa9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 CHPF2Q9P2E5 772 aa9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 DBF4Q9UBU7 674 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-221ENST00000625705 CARMIL3Q8ND23 1372 aa9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 GOLGA8CPA6NN73 597 aa9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 PPP1R3GB7ZBB8 358 aa9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 CAMTA2O94983 1202 aa9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 GTF2E1P29083 439 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 PTPN5P54829 565 aa9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 NFIXQ14938 502 aa9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 MRPL50Q8N5N7 158 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 C8orf58Q8NAV2 365 aa9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 SETDB2Q96T68 719 aa9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 DDX21Q9NR30 783 aaKnown RBP eCLIP9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 MAP3K15Q6ZN16 1313 aa9.28□□□□□ -0.92
NPLOC4-221ENST00000625705 FAM177BA6PVY3 158 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 E9PSI1 815 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 SERPINB2P05120 415 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 PROSER3Q2NL68 480 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 PROX2Q3B8N5 592 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 TBC1D9BQ66K14 1250 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 TTLL7Q6ZT98 887 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 XAGE3Q8WTP9 111 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 DDX12PQ92771 950 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 SYT17Q9BSW7 474 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 HYPKQ9NX55 129 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 NIP7Q9Y221 180 aaKnown RBP eCLIP9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 CD2APQ9Y5K6 639 aa9.27□□□□□ -0.93
NPLOC4-221ENST00000625705 POLRMTO00411 1230 aaKnown RBP9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 TCERG1O14776 1098 aaKnown RBP9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 DDX58O95786 925 aaKnown RBP9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 GPTP24298 496 aa9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 ST5P78524 1137 aa9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 EXOSC9Q06265 439 aaKnown RBP9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 DDR1Q08345 913 aa9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 GPR162Q16538 588 aa9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 CLEC4GQ6UXB4 293 aa9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 COPS6Q7L5N1 327 aa9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 NBPF5PQ86XG9 351 aaPredicted RBP9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 TSPYL6Q8N831 410 aa9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 CNBD1Q8NA66 436 aa9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 WWC3Q9ULE0 1092 aa9.26□□□□□ -0.93
NPLOC4-221ENST00000625705 C10orf71Q711Q0 1435 aa9.25□□□□□ -0.93
NPLOC4-221ENST00000625705 ERVV-1B6SEH8 477 aa9.25□□□□□ -0.93
NPLOC4-221ENST00000625705 HSP90AB3PQ58FF7 597 aa9.25□□□□□ -0.93
NPLOC4-221ENST00000625705 RIC3Q7Z5B4 369 aa9.25□□□□□ -0.93
NPLOC4-221ENST00000625705 NLGN2Q8NFZ4 835 aa9.25□□□□□ -0.93
NPLOC4-221ENST00000625705 EPAS1Q99814 870 aa9.25□□□□□ -0.93
NPLOC4-221ENST00000625705 NBPF3Q9H094 633 aa9.25□□□□□ -0.93
NPLOC4-221ENST00000625705 NUP98P52948 1817 aa9.24□□□□□ -0.93
NPLOC4-221ENST00000625705 AFDNP55196 1824 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-221ENST00000625705 TM4SF1P30408 202 aa9.24□□□□□ -0.93
NPLOC4-221ENST00000625705 PDIA6Q15084 440 aa9.24□□□□□ -0.93
NPLOC4-221ENST00000625705 HLFQ16534 295 aa9.24□□□□□ -0.93
NPLOC4-221ENST00000625705 C6orf132Q5T0Z8 1188 aa9.24□□□□□ -0.93
NPLOC4-221ENST00000625705 WNT2BQ93097 391 aa9.24□□□□□ -0.93
NPLOC4-221ENST00000625705 NYXQ9GZU5 481 aa9.24□□□□□ -0.93
NPLOC4-221ENST00000625705 ANKRD36CQ5JPF3 1778 aa9.24□□□□□ -0.93
NPLOC4-221ENST00000625705 N4BP2Q86UW6 1770 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-221ENST00000625705 ARFGEF2Q9Y6D5 1785 aa9.23□□□□□ -0.93
NPLOC4-221ENST00000625705 TPTE2Q6XPS3 522 aa9.23□□□□□ -0.93
NPLOC4-221ENST00000625705 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-221ENST00000625705 THSD4Q6ZMP0 1018 aa9.23□□□□□ -0.93
NPLOC4-221ENST00000625705 PPP1R42Q7Z4L9 355 aa9.23□□□□□ -0.93
NPLOC4-221ENST00000625705 CCDC24Q8N4L8 307 aa9.23□□□□□ -0.93
NPLOC4-221ENST00000625705 PLBD2Q8NHP8 589 aa9.23□□□□□ -0.93
NPLOC4-221ENST00000625705 ZNF521Q96K83 1311 aa9.23□□□□□ -0.93
NPLOC4-221ENST00000625705 ATP10DQ9P241 1426 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 KIF13BQ9NQT8 1826 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 A0A0G2JLW4 131 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 PDE6BP35913 854 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 TGFB2P61812 414 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 SLFN5Q08AF3 891 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 NEXNQ0ZGT2 675 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 FKBP5Q13451 457 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 E2F4Q16254 413 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 PARP10Q53GL7 1025 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 C2CD5Q86YS7 1000 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 PHAXQ9H814 394 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 WDR70Q9NW82 654 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 RABGEF1Q9UJ41 708 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 NRXN2Q9P2S2 1712 aa9.22□□□□□ -0.93
NPLOC4-221ENST00000625705 PXDNLA1KZ92 1463 aa9.21□□□□□ -0.93
NPLOC4-221ENST00000625705 H0YIN7 160 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms