RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 SH3PXD2AQ5TCZ1 1133 aa7.46□□□□□ -1.22
CDKL5-207ENST00000624700 ZNF417Q8TAU3 575 aa7.46□□□□□ -1.22
CDKL5-207ENST00000624700 TNFRSF25Q93038 417 aa7.46□□□□□ -1.22
CDKL5-207ENST00000624700 ZNF587Q96SQ5 575 aaPredicted RBP7.46□□□□□ -1.22
CDKL5-207ENST00000624700 QTRT2Q9H974 415 aaKnown RBP7.46□□□□□ -1.22
CDKL5-207ENST00000624700 FAM13BQ9NYF5 915 aa7.46□□□□□ -1.22
CDKL5-207ENST00000624700 APBA3O96018 575 aa7.45□□□□□ -1.22
CDKL5-207ENST00000624700 SND1Q7KZF4 910 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDKL5-207ENST00000624700 GLYCTKQ8IVS8 523 aa7.45□□□□□ -1.22
CDKL5-207ENST00000624700 STARD13Q9Y3M8 1113 aa7.45□□□□□ -1.22
CDKL5-207ENST00000624700 SERPINB4P48594 390 aa7.44□□□□□ -1.22
CDKL5-207ENST00000624700 NOM1Q5C9Z4 860 aaKnown RBP7.44□□□□□ -1.22
CDKL5-207ENST00000624700 IER5Q5VY09 327 aa7.44□□□□□ -1.22
CDKL5-207ENST00000624700 CAPN12Q6ZSI9 719 aa7.44□□□□□ -1.22
CDKL5-207ENST00000624700 MICALL1Q8N3F8 863 aa7.44□□□□□ -1.22
CDKL5-207ENST00000624700 IFT43Q96FT9 208 aa7.44□□□□□ -1.22
CDKL5-207ENST00000624700 CEP63Q96MT8 703 aa7.44□□□□□ -1.22
CDKL5-207ENST00000624700 ALBP02768 609 aa7.43□□□□□ -1.22
CDKL5-207ENST00000624700 ADH7P40394 386 aa7.43□□□□□ -1.22
CDKL5-207ENST00000624700 KCNQ4P56696 695 aa7.43□□□□□ -1.22
CDKL5-207ENST00000624700 TRIM28Q13263 835 aaKnown RBP7.43□□□□□ -1.22
CDKL5-207ENST00000624700 DGKZQ13574 1117 aa7.43□□□□□ -1.22
CDKL5-207ENST00000624700 COL9A3Q14050 684 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-207ENST00000624700 TMCO4Q5TGY1 634 aa7.43□□□□□ -1.22
CDKL5-207ENST00000624700 BRD7Q9NPI1 651 aa7.43□□□□□ -1.22
CDKL5-207ENST00000624700 TGFBR3LH3BV60 316 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 RPLP1P05386 114 aaKnown RBP7.42□□□□□ -1.22
CDKL5-207ENST00000624700 SCNN1AP37088 669 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 ZMYM1Q5SVZ6 1142 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 HSH2DQ96JZ2 352 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 SUSD3Q96L08 255 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 NACC1Q96RE7 527 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 CITED4Q96RK1 184 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 SAP130Q9H0E3 1048 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 C11orf16Q9NQ32 467 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 BIN2Q9UBW5 565 aaPredicted RBP7.42□□□□□ -1.22
CDKL5-207ENST00000624700 LRFN2Q9ULH4 789 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 KCNH4Q9UQ05 1017 aa7.42□□□□□ -1.22
CDKL5-207ENST00000624700 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
CDKL5-207ENST00000624700 H3BRB1 525 aa7.41□□□□□ -1.22
CDKL5-207ENST00000624700 PCSK2P16519 638 aa7.41□□□□□ -1.22
CDKL5-207ENST00000624700 AAMPQ13685 434 aa7.41□□□□□ -1.22
CDKL5-207ENST00000624700 RSPO4Q2I0M5 234 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-207ENST00000624700 RAB44Q7Z6P3 723 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-207ENST00000624700 TUT1Q9H6E5 874 aaKnown RBP7.41□□□□□ -1.22
CDKL5-207ENST00000624700 CCDC9Q9Y3X0 531 aaKnown RBP7.41□□□□□ -1.22
CDKL5-207ENST00000624700 TNFRSF10BO14763 440 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 NID1P14543 1247 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 EPB42P16452 691 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 ERCC3P19447 782 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 USP5P45974 858 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 TYRO3Q06418 890 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 CCDC27Q2M243 656 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 C8orf86Q6ZUL3 223 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 ZNF280CQ8ND82 737 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 TPSG1Q9NRR2 321 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 KLK14Q9P0G3 267 aa7.4□□□□□ -1.22
CDKL5-207ENST00000624700 MICAL2O94851 1124 aa7.39□□□□□ -1.23
CDKL5-207ENST00000624700 ZNF211Q13398 564 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-207ENST00000624700 C20orf204Q6ZNR8 217 aa7.39□□□□□ -1.23
CDKL5-207ENST00000624700 TTC16Q8NEE8 873 aa7.39□□□□□ -1.23
CDKL5-207ENST00000624700 PIK3R5Q8WYR1 880 aa7.39□□□□□ -1.23
CDKL5-207ENST00000624700 ANO2Q9NQ90 1003 aa7.39□□□□□ -1.23
CDKL5-207ENST00000624700 EIF1AXP47813 144 aaKnown RBP7.38□□□□□ -1.23
CDKL5-207ENST00000624700 TREML1Q86YW5 311 aa7.38□□□□□ -1.23
CDKL5-207ENST00000624700 BHMTQ93088 406 aa7.38□□□□□ -1.23
CDKL5-207ENST00000624700 PODXL2Q9NZ53 605 aa7.38□□□□□ -1.23
CDKL5-207ENST00000624700 BRPF3Q9ULD4 1205 aa7.38□□□□□ -1.23
CDKL5-207ENST00000624700 FNDC3AQ9Y2H6 1198 aaKnown RBP7.38□□□□□ -1.23
CDKL5-207ENST00000624700 NDUFB5O43674 189 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 LILRB5O75023 590 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 MPSTP25325 297 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 MZF1P28698 734 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-207ENST00000624700 ZAP70P43403 619 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 ARSDP51689 593 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 GRIK4Q16099 956 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 TRAPPC3LQ5T215 181 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 BTLAQ7Z6A9 289 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 ZSCAN29Q8IWY8 852 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-207ENST00000624700 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 EFCC1Q9HA90 598 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 DCTN4Q9UJW0 460 aa7.37□□□□□ -1.23
CDKL5-207ENST00000624700 DYRK3O43781 588 aa7.36□□□□□ -1.23
CDKL5-207ENST00000624700 ARHGAP4P98171 946 aa7.36□□□□□ -1.23
CDKL5-207ENST00000624700 EHHADHQ08426 723 aa7.36□□□□□ -1.23
CDKL5-207ENST00000624700 PDE3BQ13370 1112 aa7.36□□□□□ -1.23
CDKL5-207ENST00000624700 MTMR3Q13615 1198 aa7.36□□□□□ -1.23
CDKL5-207ENST00000624700 ECM1Q16610 540 aa7.36□□□□□ -1.23
CDKL5-207ENST00000624700 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
CDKL5-207ENST00000624700 DMGDHQ9UI17 866 aaKnown RBP7.36□□□□□ -1.23
CDKL5-207ENST00000624700 BCS1LQ9Y276 419 aa7.36□□□□□ -1.23
CDKL5-207ENST00000624700 C9orf172C9J069 976 aa7.35□□□□□ -1.23
CDKL5-207ENST00000624700 INPP5BP32019 993 aa7.35□□□□□ -1.23
CDKL5-207ENST00000624700 IDH3AP50213 366 aa7.35□□□□□ -1.23
CDKL5-207ENST00000624700 UBE2OQ9C0C9 1292 aaKnown RBP7.35□□□□□ -1.23
CDKL5-207ENST00000624700 SLC6A14Q9UN76 642 aa7.35□□□□□ -1.23
CDKL5-207ENST00000624700 OPLAHO14841 1288 aa7.34□□□□□ -1.23
CDKL5-207ENST00000624700 ZBTB39O15060 712 aa7.34□□□□□ -1.23
CDKL5-207ENST00000624700 NEFLP07196 543 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms