RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 RUBCNQ92622 972 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 PPP2R3AQ06190 1150 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 HLTFQ14527 1009 aaKnown RBP eCLIP7.29□□□□□ -1.24
ERCC6-209ENST00000623073 TYRO3Q06418 890 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 MCM6Q14566 821 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 IFT20Q8IY31 132 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 TSC1Q92574 1164 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 ANAPC4Q9UJX5 808 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 GSTTP1A0A1W2PQM5 241 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 MAGEA9P43362 315 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 ZNF131P52739 623 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 NUCB1Q02818 461 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 C8orf76Q96K31 380 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 CCDC69A6NI79 296 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 ACTN4O43707 911 aaKnown RBP7.29□□□□□ -1.24
ERCC6-209ENST00000623073 GCKP35557 465 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 C8orf34Q49A92 452 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 IKBKGQ9Y6K9 419 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 TTC21AQ8NDW8 1320 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 WIZO95785 1651 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 UHRF1BP1Q6BDS2 1440 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 GOLGA8KD6RF30 607 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 DUSP27Q5VZP5 1158 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 TMTC1Q8IUR5 882 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 TEX2Q8IWB9 1127 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 PARD3Q8TEW0 1356 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 CIB2O75838 187 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 VWA3BQ502W6 1294 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 STRN4Q9NRL3 753 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.29□□□□□ -1.24
ERCC6-209ENST00000623073 SATB2Q9UPW6 733 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 ERCC6Q03468 1493 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 RPUSD2Q8IZ73 545 aaKnown RBP7.29□□□□□ -1.24
ERCC6-209ENST00000623073 KIF24Q5T7B8 1368 aa7.29□□□□□ -1.24
ERCC6-209ENST00000623073 SYT1P21579 422 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 PAK2Q13177 524 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 DRP2Q13474 957 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 ZC3H15Q8WU90 426 aaKnown RBP7.28□□□□□ -1.24
ERCC6-209ENST00000623073 ZNF692Q9BU19 519 aaPredicted RBP7.28□□□□□ -1.24
ERCC6-209ENST00000623073 RNF14Q9UBS8 474 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 TRAF1Q13077 416 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 NKIRAS1Q9NYS0 192 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 BICDL2A1A5D9 508 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 MACROD2A1Z1Q3 448 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 PCK1P35558 622 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 WDR78Q5VTH9 848 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 TSPYL4Q9UJ04 414 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 RRP7AQ9Y3A4 280 aaKnown RBP7.28□□□□□ -1.24
ERCC6-209ENST00000623073 LRRD1A4D1F6 860 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 ATP2A2P16615 1042 aaKnown RBP7.28□□□□□ -1.24
ERCC6-209ENST00000623073 CDC25BP30305 580 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 ACTN2P35609 894 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 TAF7Q15545 349 aaPredicted RBP7.28□□□□□ -1.24
ERCC6-209ENST00000623073 TTC22Q5TAA0 569 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 GKAP1Q5VSY0 366 aaPredicted RBP7.28□□□□□ -1.24
ERCC6-209ENST00000623073 RAB11FIP4Q86YS3 637 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 ANKRD27Q96NW4 1050 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 VPS18Q9P253 973 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 UBASH3AP57075 661 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 EVCP57679 992 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 CCDC178Q5BJE1 867 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 TMTC2Q8N394 836 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 EVI5LQ96CN4 794 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 SH3GL3Q99963 347 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 LLPHQ9BRT6 129 aaKnown RBP7.28□□□□□ -1.24
ERCC6-209ENST00000623073 FERP16591 822 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 SMARCC2Q8TAQ2 1214 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 NBPF3Q9H094 633 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 TOP2BQ02880 1626 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 F13A1P00488 732 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 CCDC26Q8TAB7 109 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 AKR1B10O60218 316 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 EXOSC9Q06265 439 aaKnown RBP7.28□□□□□ -1.24
ERCC6-209ENST00000623073 ARAP1Q96P48 1450 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 CHUKO15111 745 aa7.28□□□□□ -1.24
ERCC6-209ENST00000623073 KRT18P05783 430 aaKnown RBP7.28□□□□□ -1.24
ERCC6-209ENST00000623073 IQCGQ9H095 443 aaKnown RBP7.28□□□□□ -1.24
ERCC6-209ENST00000623073 FSIP1Q8NA03 581 aa7.27□□□□□ -1.24
ERCC6-209ENST00000623073 TUBB6Q9BUF5 446 aa7.27□□□□□ -1.24
ERCC6-209ENST00000623073 TTC41PQ6P2S7 1318 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 GOLGA6BA6NDN3 693 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 SPDYE4A6NLX3 237 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 NMIQ13287 307 aaPredicted RBP7.27□□□□□ -1.25
ERCC6-209ENST00000623073 JADE2Q9NQC1 790 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 FAM160A1Q05DH4 1040 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 CNNM3Q8NE01 707 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 PPP1R12CQ9BZL4 782 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 TRIM6Q9C030 488 aaPredicted RBP7.27□□□□□ -1.25
ERCC6-209ENST00000623073 CSRNP2Q9H175 543 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 NOB1Q9ULX3 412 aaKnown RBP7.27□□□□□ -1.25
ERCC6-209ENST00000623073 FYB2Q5VWT5 728 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 NUP58Q9BVL2 599 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 EID1Q9Y6B2 187 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 CDCA7LQ96GN5 454 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 MAML3Q96JK9 1138 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 GBP5Q96PP8 586 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 RRAGDQ9NQL2 400 aaPredicted RBP7.27□□□□□ -1.25
ERCC6-209ENST00000623073 EIF3DO15371 548 aaKnown RBP eCLIP7.27□□□□□ -1.25
ERCC6-209ENST00000623073 TBC1D9Q6ZT07 1266 aa7.27□□□□□ -1.25
ERCC6-209ENST00000623073 PARP2Q9UGN5 583 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms