RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 DDX46Q7L014 1031 aaKnown RBP17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 ZSCAN31Q96LW9 406 aaPredicted RBP17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 NAP1L2Q9ULW6 460 aaPredicted RBP17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 ATF3P18847 181 aa17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 FBXW7Q969H0 707 aa17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 FTOQ9C0B1 505 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 NUP62CLQ9H1M0 184 aa17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 KDM3BQ7LBC6 1761 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 PTGS1P23219 599 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 TERF1P54274 439 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 TFCP2Q12800 502 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 PKNOX2Q96KN3 472 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 SPATA32Q96LK8 384 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 NRBP1Q9UHY1 535 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 COL15A1P39059 1388 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 DYNC1I1O14576 645 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 CCDC192P0DO97 292 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 LRMPQ12912 555 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 ANO6Q4KMQ2 910 aa17.03■□□□□ 0.32
PCDHGA3-203ENST00000619750 A0A0G2JLW4 131 aa17.02■□□□□ 0.32
PCDHGA3-203ENST00000619750 LETM1O95202 739 aaPredicted RBP17.02■□□□□ 0.32
PCDHGA3-203ENST00000619750 RPS6KB1P23443 525 aa17.02■□□□□ 0.32
PCDHGA3-203ENST00000619750 TYRO3Q06418 890 aa17.02■□□□□ 0.32
PCDHGA3-203ENST00000619750 BICD2Q8TD16 824 aa17.02■□□□□ 0.32
PCDHGA3-203ENST00000619750 TM6SF1Q9BZW5 370 aa17.02■□□□□ 0.32
PCDHGA3-203ENST00000619750 NLRP2Q9NX02 1062 aa17.02■□□□□ 0.32
PCDHGA3-203ENST00000619750 DBNLQ9UJU6 430 aaKnown RBP17.02■□□□□ 0.32
PCDHGA3-203ENST00000619750 MRVI1Q9Y6F6 885 aa17.02■□□□□ 0.32
PCDHGA3-203ENST00000619750 NFAT5O94916 1531 aa17.02■□□□□ 0.32
PCDHGA3-203ENST00000619750 NR1I2O75469 434 aa17.02■□□□□ 0.31
PCDHGA3-203ENST00000619750 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.31
PCDHGA3-203ENST00000619750 DRC7Q8IY82 874 aa17.02■□□□□ 0.31
PCDHGA3-203ENST00000619750 TNMDQ9H2S6 317 aa17.02■□□□□ 0.31
PCDHGA3-203ENST00000619750 TRPM3Q9HCF6 1732 aaPredicted RBP17.02■□□□□ 0.31
PCDHGA3-203ENST00000619750 USP16Q9Y5T5 823 aa17.02■□□□□ 0.31
PCDHGA3-203ENST00000619750 NEURL1BA8MQ27 555 aa17.01■□□□□ 0.31
PCDHGA3-203ENST00000619750 MAP3K11Q16584 847 aa17.01■□□□□ 0.31
PCDHGA3-203ENST00000619750 ARHGEF25Q86VW2 580 aa17.01■□□□□ 0.31
PCDHGA3-203ENST00000619750 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
PCDHGA3-203ENST00000619750 DDX21Q9NR30 783 aaKnown RBP eCLIP17.01■□□□□ 0.31
PCDHGA3-203ENST00000619750 DDX58O95786 925 aaKnown RBP17.01■□□□□ 0.31
PCDHGA3-203ENST00000619750 FGD1P98174 961 aa17.01■□□□□ 0.31
PCDHGA3-203ENST00000619750 ERCC4Q92889 916 aaPredicted RBP17.01■□□□□ 0.31
PCDHGA3-203ENST00000619750 DBNDD2Q9BQY9 259 aa17.01■□□□□ 0.31
PCDHGA3-203ENST00000619750 ZNF335Q9H4Z2 1342 aaPredicted RBP17■□□□□ 0.31
PCDHGA3-203ENST00000619750 PSMA5P28066 241 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 AMOTQ4VCS5 1084 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 CHST3Q7LGC8 479 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 CADPS2Q86UW7 1296 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 ZNF496Q96IT1 587 aaPredicted RBP17■□□□□ 0.31
PCDHGA3-203ENST00000619750 TAF5LO75529 589 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 GUCY1B3Q02153 619 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 NEXNQ0ZGT2 675 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 ZNF790Q6PG37 636 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 Q6ZUG5 572 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 ZNF710Q8N1W2 664 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 MYRIPQ8NFW9 859 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 BRF1Q92994 677 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 DNAJC25Q9H1X3 360 aa17■□□□□ 0.31
PCDHGA3-203ENST00000619750 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
PCDHGA3-203ENST00000619750 GCKRQ14397 625 aa16.99■□□□□ 0.31
PCDHGA3-203ENST00000619750 RNF20Q5VTR2 975 aa16.99■□□□□ 0.31
PCDHGA3-203ENST00000619750 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
PCDHGA3-203ENST00000619750 LEO1Q8WVC0 666 aaPredicted RBP16.99■□□□□ 0.31
PCDHGA3-203ENST00000619750 KCNB2Q92953 911 aa16.99■□□□□ 0.31
PCDHGA3-203ENST00000619750 PGBD1Q96JS3 809 aa16.99■□□□□ 0.31
PCDHGA3-203ENST00000619750 CBX8Q9HC52 389 aa16.98■□□□□ 0.31
PCDHGA3-203ENST00000619750 CCT2P78371 535 aaKnown RBP16.98■□□□□ 0.31
PCDHGA3-203ENST00000619750 CCDC186Q7Z3E2 898 aa16.98■□□□□ 0.31
PCDHGA3-203ENST00000619750 NEUROD6Q96NK8 337 aa16.98■□□□□ 0.31
PCDHGA3-203ENST00000619750 H3BQV1 296 aa16.97■□□□□ 0.31
PCDHGA3-203ENST00000619750 IFFO2Q5TF58 517 aa16.97■□□□□ 0.31
PCDHGA3-203ENST00000619750 FAM200AQ8TCP9 573 aa16.97■□□□□ 0.31
PCDHGA3-203ENST00000619750 NCOA5Q9HCD5 579 aaKnown RBP16.97■□□□□ 0.31
PCDHGA3-203ENST00000619750 CYP21A2P08686 494 aa16.97■□□□□ 0.31
PCDHGA3-203ENST00000619750 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
PCDHGA3-203ENST00000619750 MED23Q9ULK4 1368 aa16.97■□□□□ 0.31
PCDHGA3-203ENST00000619750 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
PCDHGA3-203ENST00000619750 TNNI3KQ59H18 835 aa16.96■□□□□ 0.31
PCDHGA3-203ENST00000619750 KIAA1524Q8TCG1 905 aa16.96■□□□□ 0.31
PCDHGA3-203ENST00000619750 C16orf45Q96MC5 204 aaPredicted RBP16.96■□□□□ 0.31
PCDHGA3-203ENST00000619750 NEK1Q96PY6 1258 aa16.96■□□□□ 0.31
PCDHGA3-203ENST00000619750 FPGT-TNNI3KV9GXZ4 949 aa16.96■□□□□ 0.31
PCDHGA3-203ENST00000619750 A0A087WZG4 1122 aa16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 HIP1O00291 1037 aa16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 CSB-PGBD3P0DP91 1061 aa16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 PTPN12Q05209 780 aaKnown RBP16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 STOX1Q6ZVD7 989 aa16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 RAB11FIP4Q86YS3 637 aa16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 ZNF609O15014 1411 aa16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 RIOK3O14730 519 aaKnown RBP16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 APOBRQ0VD83 1088 aa16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 ALS2Q96Q42 1657 aa16.95■□□□□ 0.3
PCDHGA3-203ENST00000619750 GOLIM4O00461 696 aa16.94■□□□□ 0.3
PCDHGA3-203ENST00000619750 PDCP20941 246 aa16.94■□□□□ 0.3
PCDHGA3-203ENST00000619750 TIMM10P62072 90 aa16.94■□□□□ 0.3
PCDHGA3-203ENST00000619750 SCRN1Q12765 414 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms