RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 ARID5BQ14865 1188 aa27.28■■□□□ 1.96
PCSK6-218ENST00000619160 FILIP1Q7Z7B0 1213 aa27.28■■□□□ 1.96
PCSK6-218ENST00000619160 PLA2G4DQ86XP0 818 aa27.28■■□□□ 1.96
PCSK6-218ENST00000619160 A0A087WWV3 80 aa27.28■■□□□ 1.96
PCSK6-218ENST00000619160 LRRC2Q9BYS8 371 aa27.28■■□□□ 1.96
PCSK6-218ENST00000619160 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.28■■□□□ 1.96
PCSK6-218ENST00000619160 V9GYY5 206 aaPredicted RBP27.28■■□□□ 1.96
PCSK6-218ENST00000619160 ZNF530Q6P9A1 599 aaPredicted RBP27.27■■□□□ 1.96
PCSK6-218ENST00000619160 TDRD7Q8NHU6 1098 aaKnown RBP27.27■■□□□ 1.96
PCSK6-218ENST00000619160 BICC1Q9H694 974 aaKnown RBP27.27■■□□□ 1.96
PCSK6-218ENST00000619160 OGFRQ9NZT2 677 aa27.27■■□□□ 1.96
PCSK6-218ENST00000619160 KLHL34Q8N239 644 aa27.27■■□□□ 1.96
PCSK6-218ENST00000619160 BECN2A8MW95 431 aa27.26■■□□□ 1.95
PCSK6-218ENST00000619160 SUCLG2Q96I99 432 aa27.26■■□□□ 1.95
PCSK6-218ENST00000619160 CCDC9Q9Y3X0 531 aaKnown RBP27.26■■□□□ 1.95
PCSK6-218ENST00000619160 NDUFB9Q9Y6M9 179 aa27.26■■□□□ 1.95
PCSK6-218ENST00000619160 PRAMEF22A3QJZ6 481 aa27.26■■□□□ 1.95
PCSK6-218ENST00000619160 MTX1Q13505 466 aa27.26■■□□□ 1.95
PCSK6-218ENST00000619160 TRMT1Q9NXH9 659 aaKnown RBP27.26■■□□□ 1.95
PCSK6-218ENST00000619160 NBPF6Q5VWK0 638 aa27.25■■□□□ 1.95
PCSK6-218ENST00000619160 CEP135Q66GS9 1140 aa27.25■■□□□ 1.95
PCSK6-218ENST00000619160 NBPF4Q96M43 638 aa27.25■■□□□ 1.95
PCSK6-218ENST00000619160 EID1Q9Y6B2 187 aa27.25■■□□□ 1.95
PCSK6-218ENST00000619160 PDIA4P13667 645 aaKnown RBP27.25■■□□□ 1.95
PCSK6-218ENST00000619160 TRERF1Q96PN7 1200 aa27.25■■□□□ 1.95
PCSK6-218ENST00000619160 CHMP4AQ9BY43 222 aa27.25■■□□□ 1.95
PCSK6-218ENST00000619160 FEZ1Q99689 392 aa27.24■■□□□ 1.95
PCSK6-218ENST00000619160 KSR2Q6VAB6 950 aa27.23■■□□□ 1.95
PCSK6-218ENST00000619160 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.23■■□□□ 1.95
PCSK6-218ENST00000619160 CTNNA3Q9UI47 895 aa27.23■■□□□ 1.95
PCSK6-218ENST00000619160 PAXBP1Q9Y5B6 917 aa27.23■■□□□ 1.95
PCSK6-218ENST00000619160 FTOQ9C0B1 505 aaKnown RBP eCLIP27.23■■□□□ 1.954e-8■□□□□ 8.9
PCSK6-218ENST00000619160 USP16Q9Y5T5 823 aa27.23■■□□□ 1.95
PCSK6-218ENST00000619160 C11orf57Q6ZUT1 292 aaPredicted RBP27.22■■□□□ 1.95
PCSK6-218ENST00000619160 LRRC59Q96AG4 307 aaKnown RBP27.22■■□□□ 1.95
PCSK6-218ENST00000619160 USP27XA6NNY8 438 aa27.22■■□□□ 1.95
PCSK6-218ENST00000619160 GRM8O00222 908 aa27.22■■□□□ 1.95
PCSK6-218ENST00000619160 CEBPAP49715 358 aaPredicted RBP27.22■■□□□ 1.95
PCSK6-218ENST00000619160 NALCNQ8IZF0 1738 aa27.22■■□□□ 1.95
PCSK6-218ENST00000619160 ALDH1L1O75891 902 aa27.22■■□□□ 1.95
PCSK6-218ENST00000619160 ERCC4Q92889 916 aaPredicted RBP27.22■■□□□ 1.95
PCSK6-218ENST00000619160 HDAC5Q9UQL6 1122 aa27.22■■□□□ 1.95
PCSK6-218ENST00000619160 NPHP1O15259 732 aa27.21■■□□□ 1.95
PCSK6-218ENST00000619160 HOXB7P09629 217 aa27.21■■□□□ 1.95
PCSK6-218ENST00000619160 Q6ZUG5 572 aa27.21■■□□□ 1.95
PCSK6-218ENST00000619160 PTPRUQ92729 1446 aa27.21■■□□□ 1.95
PCSK6-218ENST00000619160 CCDC129Q6ZRS4 1044 aa27.21■■□□□ 1.95
PCSK6-218ENST00000619160 AGLP35573 1532 aa27.21■■□□□ 1.95
PCSK6-218ENST00000619160 CHGBP05060 677 aa27.2■■□□□ 1.95
PCSK6-218ENST00000619160 SKILP12757 684 aa27.2■■□□□ 1.95
PCSK6-218ENST00000619160 NEK1Q96PY6 1258 aa27.2■■□□□ 1.95
PCSK6-218ENST00000619160 SLFN14P0C7P3 912 aa27.2■■□□□ 1.94
PCSK6-218ENST00000619160 PTPN14Q15678 1187 aa27.2■■□□□ 1.94
PCSK6-218ENST00000619160 LRRC8AQ8IWT6 810 aa27.2■■□□□ 1.94
PCSK6-218ENST00000619160 DNAJC2Q99543 621 aaKnown RBP27.2■■□□□ 1.94
PCSK6-218ENST00000619160 CFAP45Q9UL16 551 aa27.2■■□□□ 1.94
PCSK6-218ENST00000619160 TSPOAP1O95153 1857 aa27.19■■□□□ 1.94
PCSK6-218ENST00000619160 GTF3C6Q969F1 213 aa27.19■■□□□ 1.94
PCSK6-218ENST00000619160 IRX5P78411 483 aaPredicted RBP27.19■■□□□ 1.94
PCSK6-218ENST00000619160 RBM43Q6ZSC3 357 aaKnown RBP27.19■■□□□ 1.94
PCSK6-218ENST00000619160 CCAR1Q8IX12 1150 aaKnown RBP27.19■■□□□ 1.94
PCSK6-218ENST00000619160 FMN2Q9NZ56 1722 aa27.18■■□□□ 1.94
PCSK6-218ENST00000619160 RESTQ13127 1097 aa27.18■■□□□ 1.94
PCSK6-218ENST00000619160 TAF5LO75529 589 aa27.18■■□□□ 1.94
PCSK6-218ENST00000619160 CEMIPQ8WUJ3 1361 aa27.18■■□□□ 1.94
PCSK6-218ENST00000619160 HMG20BQ9P0W2 317 aa27.18■■□□□ 1.94
PCSK6-218ENST00000619160 GUCY1B3Q02153 619 aa27.17■■□□□ 1.94
PCSK6-218ENST00000619160 C1orf141Q5JVX7 400 aa27.17■■□□□ 1.94
PCSK6-218ENST00000619160 CCDC73Q6ZRK6 1079 aa27.17■■□□□ 1.94
PCSK6-218ENST00000619160 KAZALD1Q96I82 304 aa27.17■■□□□ 1.94
PCSK6-218ENST00000619160 SEC62Q99442 399 aaKnown RBP27.17■■□□□ 1.94
PCSK6-218ENST00000619160 TAF3Q5VWG9 929 aa27.17■■□□□ 1.94
PCSK6-218ENST00000619160 RIC3Q7Z5B4 369 aa27.17■■□□□ 1.94
PCSK6-218ENST00000619160 ST7Q9NRC1 585 aa27.17■■□□□ 1.94
PCSK6-218ENST00000619160 ZNF215Q9UL58 517 aaPredicted RBP27.17■■□□□ 1.94
PCSK6-218ENST00000619160 NPHP4O75161 1426 aaPredicted RBP27.16■■□□□ 1.94
PCSK6-218ENST00000619160 LINS1Q8NG48 757 aa27.16■■□□□ 1.94
PCSK6-218ENST00000619160 CCDC69A6NI79 296 aa27.15■■□□□ 1.94
PCSK6-218ENST00000619160 KINO60870 393 aaKnown RBP27.15■■□□□ 1.94
PCSK6-218ENST00000619160 LRRC37A3O60309 1634 aa27.15■■□□□ 1.94
PCSK6-218ENST00000619160 STX1AQ16623 288 aa27.15■■□□□ 1.94
PCSK6-218ENST00000619160 GIGYF1O75420 1035 aaPredicted RBP27.15■■□□□ 1.94
PCSK6-218ENST00000619160 KRT32Q14532 448 aa27.15■■□□□ 1.94
PCSK6-218ENST00000619160 CACNA1FO60840 1977 aa27.14■■□□□ 1.94
PCSK6-218ENST00000619160 MYL6BP14649 208 aa27.14■■□□□ 1.94
PCSK6-218ENST00000619160 ME1P48163 572 aa27.14■■□□□ 1.94
PCSK6-218ENST00000619160 CCT2P78371 535 aaKnown RBP27.14■■□□□ 1.94
PCSK6-218ENST00000619160 IQCB1Q15051 598 aa27.14■■□□□ 1.94
PCSK6-218ENST00000619160 DDX41Q9UJV9 622 aaKnown RBP27.14■■□□□ 1.94
PCSK6-218ENST00000619160 PLEKHG1Q9ULL1 1385 aa27.14■■□□□ 1.94
PCSK6-218ENST00000619160 DDX58O95786 925 aaKnown RBP27.13■■□□□ 1.93
PCSK6-218ENST00000619160 TOPAZ1Q8N9V7 1692 aa27.13■■□□□ 1.93
PCSK6-218ENST00000619160 PLEKHO1Q53GL0 409 aaPredicted RBP27.13■■□□□ 1.93
PCSK6-218ENST00000619160 ZSCAN16Q9H4T2 348 aaPredicted RBP27.13■■□□□ 1.93
PCSK6-218ENST00000619160 SCRN1Q12765 414 aa27.13■■□□□ 1.93
PCSK6-218ENST00000619160 AKAP4Q5JQC9 854 aa27.13■■□□□ 1.93
PCSK6-218ENST00000619160 RBM33Q96EV2 1170 aaKnown RBP27.13■■□□□ 1.93
PCSK6-218ENST00000619160 MED23Q9ULK4 1368 aa27.12■■□□□ 1.93
PCSK6-218ENST00000619160 CAVIN2O95810 425 aa27.12■■□□□ 1.93
PCSK6-218ENST00000619160 AOPEPQ8N6M6 819 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms