RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 MYL6BP14649 208 aa11.92□□□□□ -0.5
SYN3-213ENST00000619146 CIAPIN1Q6FI81 312 aa11.92□□□□□ -0.5
SYN3-213ENST00000619146 ZBTB3Q9H5J0 574 aa11.92□□□□□ -0.5
SYN3-213ENST00000619146 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
SYN3-213ENST00000619146 DDX60Q8IY21 1712 aaKnown RBP11.91□□□□□ -0.5
SYN3-213ENST00000619146 UBN2Q6ZU65 1347 aa11.91□□□□□ -0.5
SYN3-213ENST00000619146 SCN9AQ15858 1988 aa11.91□□□□□ -0.5
SYN3-213ENST00000619146 RGS19P49795 217 aa11.91□□□□□ -0.5
SYN3-213ENST00000619146 SUSD4Q5VX71 490 aa11.91□□□□□ -0.5
SYN3-213ENST00000619146 GMPSP49915 693 aaPredicted RBP11.9□□□□□ -0.5
SYN3-213ENST00000619146 SLFN5Q08AF3 891 aa11.9□□□□□ -0.5
SYN3-213ENST00000619146 CRY2Q49AN0 593 aa11.9□□□□□ -0.5
SYN3-213ENST00000619146 USP50Q70EL3 339 aaPredicted RBP11.9□□□□□ -0.5
SYN3-213ENST00000619146 SAPCD2Q86UD0 394 aa11.9□□□□□ -0.5
SYN3-213ENST00000619146 GPRC5DQ9NZD1 345 aa11.9□□□□□ -0.5
SYN3-213ENST00000619146 SPEF2Q9C093 1822 aa11.9□□□□□ -0.5
SYN3-213ENST00000619146 RAD17O75943 681 aa11.89□□□□□ -0.51
SYN3-213ENST00000619146 SOX10P56693 466 aa11.89□□□□□ -0.51
SYN3-213ENST00000619146 CXCL9Q07325 125 aa11.89□□□□□ -0.51
SYN3-213ENST00000619146 RBM17Q96I25 401 aaKnown RBP11.89□□□□□ -0.51
SYN3-213ENST00000619146 BCL2L13Q9BXK5 485 aa11.89□□□□□ -0.51
SYN3-213ENST00000619146 NYXQ9GZU5 481 aa11.89□□□□□ -0.51
SYN3-213ENST00000619146 ADARB2Q9NS39 739 aaKnown RBP11.89□□□□□ -0.51
SYN3-213ENST00000619146 IFT57Q9NWB7 429 aa11.89□□□□□ -0.51
SYN3-213ENST00000619146 MAP3K15Q6ZN16 1313 aa11.88□□□□□ -0.51
SYN3-213ENST00000619146 MAP2K2P36507 400 aa11.88□□□□□ -0.51
SYN3-213ENST00000619146 GNAI1P63096 354 aa11.88□□□□□ -0.51
SYN3-213ENST00000619146 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
SYN3-213ENST00000619146 TRMT2AQ8IZ69 625 aaKnown RBP11.88□□□□□ -0.51
SYN3-213ENST00000619146 TRPM4Q8TD43 1214 aa11.88□□□□□ -0.51
SYN3-213ENST00000619146 CDCA7LQ96GN5 454 aa11.88□□□□□ -0.51
SYN3-213ENST00000619146 THUMPD2Q9BTF0 503 aaKnown RBP11.88□□□□□ -0.51
SYN3-213ENST00000619146 BABAM1Q9NWV8 329 aa11.88□□□□□ -0.51
SYN3-213ENST00000619146 RIC1Q4ADV7 1423 aa11.87□□□□□ -0.51
SYN3-213ENST00000619146 HIRAP54198 1017 aaPredicted RBP11.87□□□□□ -0.51
SYN3-213ENST00000619146 CC2D2BQ6DHV5 1058 aa11.87□□□□□ -0.51
SYN3-213ENST00000619146 USP48Q86UV5 1035 aa11.87□□□□□ -0.51
SYN3-213ENST00000619146 LRRC37AA6NMS7 1700 aa11.86□□□□□ -0.51
SYN3-213ENST00000619146 NTSR2O95665 410 aa11.86□□□□□ -0.51
SYN3-213ENST00000619146 ANXA1P04083 346 aa11.86□□□□□ -0.51
SYN3-213ENST00000619146 HOXA10P31260 410 aaPredicted RBP11.86□□□□□ -0.51
SYN3-213ENST00000619146 TAF7Q15545 349 aaPredicted RBP11.86□□□□□ -0.51
SYN3-213ENST00000619146 DUSP27Q5VZP5 1158 aa11.86□□□□□ -0.51
SYN3-213ENST00000619146 CRAMP1Q96RY5 1269 aa11.86□□□□□ -0.51
SYN3-213ENST00000619146 COL4A1P02462 1669 aa11.86□□□□□ -0.51
SYN3-213ENST00000619146 PSME4Q14997 1843 aa11.86□□□□□ -0.51
SYN3-213ENST00000619146 ABCC4O15439 1325 aa11.86□□□□□ -0.51
SYN3-213ENST00000619146 DUOX1Q9NRD9 1551 aa11.85□□□□□ -0.51
SYN3-213ENST00000619146 CHL1O00533 1208 aa11.85□□□□□ -0.51
SYN3-213ENST00000619146 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
SYN3-213ENST00000619146 BRPF1P55201 1214 aaPredicted RBP11.85□□□□□ -0.51
SYN3-213ENST00000619146 HUNKP57058 714 aa11.85□□□□□ -0.51
SYN3-213ENST00000619146 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
SYN3-213ENST00000619146 TMX4Q9H1E5 349 aaPredicted RBP11.85□□□□□ -0.51
SYN3-213ENST00000619146 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
SYN3-213ENST00000619146 ZNRF3Q9ULT6 936 aa11.85□□□□□ -0.51
SYN3-213ENST00000619146 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
SYN3-213ENST00000619146 ERVV-1B6SEH8 477 aa11.84□□□□□ -0.51
SYN3-213ENST00000619146 CT47B1P0C2W7 299 aaPredicted RBP11.84□□□□□ -0.51
SYN3-213ENST00000619146 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
SYN3-213ENST00000619146 DPP8Q6V1X1 898 aaPredicted RBP11.84□□□□□ -0.51
SYN3-213ENST00000619146 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
SYN3-213ENST00000619146 ZNF34Q8IZ26 560 aa11.84□□□□□ -0.51
SYN3-213ENST00000619146 NECTIN2Q92692 538 aa11.84□□□□□ -0.51
SYN3-213ENST00000619146 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
SYN3-213ENST00000619146 CNOT7Q9UIV1 285 aaKnown RBP11.84□□□□□ -0.51
SYN3-213ENST00000619146 ATP6V0A2Q9Y487 856 aa11.84□□□□□ -0.51
SYN3-213ENST00000619146 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
SYN3-213ENST00000619146 FANCIQ9NVI1 1328 aa11.84□□□□□ -0.51
SYN3-213ENST00000619146 YDJCA8MPS7 323 aa11.83□□□□□ -0.52
SYN3-213ENST00000619146 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
SYN3-213ENST00000619146 TBC1D10BQ4KMP7 808 aaPredicted RBP11.83□□□□□ -0.52
SYN3-213ENST00000619146 MPNDQ8N594 471 aa11.83□□□□□ -0.52
SYN3-213ENST00000619146 NLRP3Q96P20 1036 aa11.83□□□□□ -0.52
SYN3-213ENST00000619146 ADM5C9JUS6 153 aa11.82□□□□□ -0.52
SYN3-213ENST00000619146 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
SYN3-213ENST00000619146 CA12O43570 354 aa11.82□□□□□ -0.52
SYN3-213ENST00000619146 TRPA1O75762 1119 aa11.82□□□□□ -0.52
SYN3-213ENST00000619146 EGFRP00533 1210 aa11.82□□□□□ -0.52
SYN3-213ENST00000619146 EIF4A1P60842 406 aaKnown RBP11.82□□□□□ -0.52
SYN3-213ENST00000619146 CDC37L1Q7L3B6 337 aa11.82□□□□□ -0.52
SYN3-213ENST00000619146 PPP1R42Q7Z4L9 355 aa11.82□□□□□ -0.52
SYN3-213ENST00000619146 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
SYN3-213ENST00000619146 MBIPQ9NS73 344 aa11.82□□□□□ -0.52
SYN3-213ENST00000619146 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
SYN3-213ENST00000619146 RGL2O15211 777 aa11.81□□□□□ -0.52
SYN3-213ENST00000619146 KIF23Q02241 960 aaPredicted RBP11.81□□□□□ -0.52
SYN3-213ENST00000619146 AIMP1Q12904 312 aaKnown RBP11.81□□□□□ -0.52
SYN3-213ENST00000619146 PROSER3Q2NL68 480 aa11.81□□□□□ -0.52
SYN3-213ENST00000619146 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
SYN3-213ENST00000619146 SUPT20HQ8NEM7 779 aa11.81□□□□□ -0.52
SYN3-213ENST00000619146 TSR2Q969E8 191 aaKnown RBP11.81□□□□□ -0.52
SYN3-213ENST00000619146 UTP14AQ9BVJ6 771 aaKnown RBP11.81□□□□□ -0.52
SYN3-213ENST00000619146 DBNDD1Q9H9R9 158 aa11.81□□□□□ -0.52
SYN3-213ENST00000619146 IBTKQ9P2D0 1353 aaPredicted RBP11.8□□□□□ -0.52
SYN3-213ENST00000619146 H7C1D1 291 aa11.8□□□□□ -0.52
SYN3-213ENST00000619146 ZNF157P51786 506 aaPredicted RBP11.8□□□□□ -0.52
SYN3-213ENST00000619146 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
SYN3-213ENST00000619146 NOGQ13253 232 aa11.8□□□□□ -0.52
SYN3-213ENST00000619146 TNIP1Q15025 636 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms