RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	POLR3E	Q9NVU0	708 aa		4.95	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TMEM238L	A0A1B0GVL6	79 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	RECK	O95980	971 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	NAT2	P11245	290 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	GOLGA2	Q08379	1002 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	UBE4A	Q14139	1066 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	AMHR2	Q16671	573 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	AMOT	Q4VCS5	1084 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TTC39B	Q5VTQ0	682 aa	Predicted RBP	4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	DIEXF	Q68CQ4	756 aa	Known RBP	4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	MTERF4	Q7Z6M4	381 aa	Known RBP	4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	IQCF2	Q8IXL9	164 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	LMNTD2	Q8IXW0	634 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TRIM52	Q96A61	297 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CHMP4C	Q96CF2	233 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	NCAPG	Q9BPX3	1015 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	HOXC10	Q9NYD6	342 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PAXBP1	Q9Y5B6	917 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TNNT2	P45379	298 aa	Predicted RBP	4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	GOLGA1	Q92805	767 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CFAP53	Q96M91	514 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TTC14	Q96N46	770 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TEX13A	Q9BXU3	409 aa	Predicted RBP	4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	SFMBT1	Q9UHJ3	866 aa		4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	NOL7	Q9UMY1	257 aa	Known RBP	4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	RPRD2	Q5VT52	1461 aa	Known RBP	4.94	□□□□□ -1.62
UBE2D3-233	ENST00000618836	ZNF132	P52740	706 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	MDM2	Q00987	491 aa	Predicted RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	OTUD6A	Q7L8S5	288 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	NLRP13	Q86W25	1043 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TTC30A	Q86WT1	665 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	RUNDC1	Q96C34	613 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TSPYL1	Q9H0U9	437 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TULP2	O00295	520 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CHL1	O00533	1208 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	GNPAT	O15228	680 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TERF1	P54274	439 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PTK7	Q13308	1070 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	NGDN	Q8NEJ9	315 aa	Known RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	UTP6	Q9NYH9	597 aa	Known RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	SLC45A1	Q9Y2W3	748 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	ARHGEF5	Q12774	1597 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	ERVK-7	P63135	1459 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	HIP1R	O75146	1068 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	C7	P10643	843 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CCDC92	Q53HC0	331 aa	Predicted RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CCDC73	Q6ZRK6	1079 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	SP7	Q8TDD2	431 aa	Predicted RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	GIMAP1	Q8WWP7	306 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CCDC47	Q96A33	483 aa	Known RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	MED4	Q9NPJ6	270 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	AVEN	Q9NQS1	362 aa	Predicted RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	MKRN1	Q9UHC7	482 aa	Known RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	DIS3	Q9Y2L1	958 aa	Known RBP	4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TRPM1	Q7Z4N2	1603 aa		4.93	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PARP4	Q9UKK3	1724 aa	Known RBP	4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	C19orf67	A6NJJ6	358 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PES1	O00541	588 aa	Known RBP	4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	HTATSF1	O43719	755 aa	Known RBP	4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TPPP	O94811	219 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	LONRF1	Q17RB8	773 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	ALDH1L2	Q3SY69	923 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CCDC70	Q6NSX1	233 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PIK3R5	Q8WYR1	880 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PBXIP1	Q96AQ6	731 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PIF1	Q9H611	641 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	SNRK	Q9NRH2	765 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	SMC4	Q9NTJ3	1288 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TRIM64C	A6NLI5	447 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	ATIC	P31939	592 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	MAGEA8	P43361	318 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	HMGN5	P82970	282 aa	Known RBP	4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	CCDC144B	Q3MJ40	725 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	FMNL3	Q8IVF7	1028 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	KLRG1	Q96E93	195 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	LZTS2	Q9BRK4	669 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TMEM63C	Q9P1W3	806 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PRC1	O43663	620 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	BBOX1	O75936	387 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	IBSP	P21815	317 aa	Predicted RBP	4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	E2F5	Q15329	346 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	NFXL1	Q6ZNB6	911 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	MICALL1	Q8N3F8	863 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	KIAA1958	Q8N8K9	716 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	KLHL23	Q8NBE8	558 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	HLA-C	Q95604	372 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	PCDH12	Q9NPG4	1184 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	KIF13B	Q9NQT8	1826 aa		4.92	□□□□□ -1.62
UBE2D3-233	ENST00000618836	FOSL1	P15407	271 aa		4.91	□□□□□ -1.62
UBE2D3-233	ENST00000618836	HOXD10	P28358	340 aa		4.91	□□□□□ -1.62
UBE2D3-233	ENST00000618836	MAP9	Q49MG5	647 aa		4.91	□□□□□ -1.62
UBE2D3-233	ENST00000618836	C16orf87	Q6PH81	154 aa		4.91	□□□□□ -1.62
UBE2D3-233	ENST00000618836	SLF2	Q8IX21	1173 aa		4.91	□□□□□ -1.62
UBE2D3-233	ENST00000618836	ZNF396	Q96N95	335 aa	Predicted RBP	4.91	□□□□□ -1.62
UBE2D3-233	ENST00000618836	TBC1D2B	Q9UPU7	963 aa		4.91	□□□□□ -1.62
UBE2D3-233	ENST00000618836	COG6	Q9Y2V7	657 aa		4.91	□□□□□ -1.62
UBE2D3-233	ENST00000618836	COL4A3BP	Q9Y5P4	624 aa		4.91	□□□□□ -1.62
UBE2D3-233	ENST00000618836	IFRD1	O00458	451 aa	Predicted RBP	4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms