RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 SHISA8B8ZZ34 492 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 GOLIM4O00461 696 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 THBS1P07996 1170 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 RBM25P49756 843 aaKnown RBP4.31□□□□□ -1.72
SMC5-204ENST00000618375 SNRPNP63162 240 aaKnown RBP4.31□□□□□ -1.72
SMC5-204ENST00000618375 HMGN5P82970 282 aaKnown RBP4.31□□□□□ -1.72
SMC5-204ENST00000618375 CTBSQ01459 385 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 NCOA4Q13772 614 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 GRIN2CQ14957 1233 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 SETDB1Q15047 1291 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 PLA2G4EQ3MJ16 856 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 NLRP8Q86W28 1048 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 AEBP1Q8IUX7 1158 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 DEPDC4Q8N2C3 294 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 MYRIPQ8NFW9 859 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 FAM210AQ96ND0 272 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.31□□□□□ -1.72
SMC5-204ENST00000618375 SMC4Q9NTJ3 1288 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 DONSONQ9NYP3 566 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 CHIC2Q9UKJ5 165 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 POLR1AO95602 1720 aaPredicted RBP4.31□□□□□ -1.72
SMC5-204ENST00000618375 CTTNBP2Q8WZ74 1663 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 MYOM3Q5VTT5 1437 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 AKNAQ7Z591 1439 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 ZMYM3Q14202 1370 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 KTN1Q86UP2 1357 aaKnown RBP4.3□□□□□ -1.72
SMC5-204ENST00000618375 NEURL1BA8MQ27 555 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 TMEM229AB2RXF0 380 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 CDK2AP1O14519 115 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 LZTS3O60299 673 aaPredicted RBP4.3□□□□□ -1.72
SMC5-204ENST00000618375 HSP90AB1P08238 724 aaKnown RBP4.3□□□□□ -1.72
SMC5-204ENST00000618375 CD33P20138 364 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 ATP4AP20648 1035 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.3□□□□□ -1.72
SMC5-204ENST00000618375 MED4Q9NPJ6 270 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 CHMP3Q9Y3E7 222 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 R3HCC1Q9Y3T6 440 aaKnown RBP4.3□□□□□ -1.72
SMC5-204ENST00000618375 KIF21BO75037 1637 aa4.3□□□□□ -1.72
SMC5-204ENST00000618375 ARHGAP31Q2M1Z3 1444 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 PLEKHD1A6NEE1 506 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 USP17L5A8MUK1 530 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 C2CD2LO14523 706 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 MAPTP10636 758 aaKnown RBP4.29□□□□□ -1.72
SMC5-204ENST00000618375 NEFHP12036 1026 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 CAPN2P17655 700 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 ADH6P28332 368 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 NOP2P46087 812 aaKnown RBP4.29□□□□□ -1.72
SMC5-204ENST00000618375 GTF2A1P52655 376 aaPredicted RBP4.29□□□□□ -1.72
SMC5-204ENST00000618375 FLIIQ13045 1269 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 MTA1Q13330 715 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 CT47A1Q5JQC4 288 aaPredicted RBP4.29□□□□□ -1.72
SMC5-204ENST00000618375 ICE2Q659A1 982 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 SLCO4C1Q6ZQN7 724 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 TSHZ1Q6ZSZ6 1077 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 ZNF771Q7L3S4 317 aaPredicted RBP4.29□□□□□ -1.72
SMC5-204ENST00000618375 TRIM50Q86XT4 487 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 PDCL2Q8N4E4 241 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 ITFG2Q969R8 447 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 POM121Q96HA1 1249 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 SLC4A9Q96Q91 983 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 ZDHHC3Q9NYG2 299 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 FEZ2Q9UHY8 353 aaPredicted RBP4.29□□□□□ -1.72
SMC5-204ENST00000618375 NOL7Q9UMY1 257 aaKnown RBP4.29□□□□□ -1.72
SMC5-204ENST00000618375 KNSTRNQ9Y448 316 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 PCDHGA11Q9Y5H2 935 aa4.29□□□□□ -1.72
SMC5-204ENST00000618375 KLHL33A6NCF5 533 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 GNB5O14775 395 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 ARAFP10398 606 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 GUCY2CP25092 1073 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 MCM4P33991 863 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 ATP1A2P50993 1020 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 TRDNQ13061 729 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 UBAP2LQ14157 1087 aaKnown RBP4.28□□□□□ -1.72
SMC5-204ENST00000618375 MTFR1Q15390 333 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 SYCP1Q15431 976 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 HSP90AB4PQ58FF6 505 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 TBCELQ5QJ74 424 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 C1orf229Q6ZS94 237 aaPredicted RBP4.28□□□□□ -1.72
SMC5-204ENST00000618375 ANKRD23Q86SG2 305 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 NFATC2IPQ8NCF5 419 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 TPCN2Q8NHX9 752 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 L3MBTL2Q969R5 705 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 SLC26A8Q96RN1 970 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 SPOCK3Q9BQ16 436 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 ALG2Q9H553 416 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 ANTXR1Q9H6X2 564 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 ZNF358Q9NW07 568 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 OGFRQ9NZT2 677 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 MARK1Q9P0L2 795 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 CLIP1P30622 1438 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 YEATS2Q9ULM3 1422 aa4.28□□□□□ -1.72
SMC5-204ENST00000618375 NLRP1Q9C000 1473 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 LOC102724159A0A0B4J2E5 919 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 PPP1R12AO14974 1030 aaPredicted RBP4.27□□□□□ -1.73
SMC5-204ENST00000618375 ZNF853P0CG23 659 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 EPXP11678 715 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 LIG1P18858 919 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 ALAS2P22557 587 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 PCBP4P57723 403 aaKnown RBP4.27□□□□□ -1.73
SMC5-204ENST00000618375 CBX1P83916 185 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms