RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 OLFM4Q6UX06 510 aa9.88□□□□□ -0.83
SCAMP1-206ENST00000618166 MPNDQ8N594 471 aa9.88□□□□□ -0.83
SCAMP1-206ENST00000618166 ZNF408Q9H9D4 720 aa9.88□□□□□ -0.83
SCAMP1-206ENST00000618166 ANKRD31Q8N7Z5 1873 aa9.87□□□□□ -0.83
SCAMP1-206ENST00000618166 SLX4Q8IY92 1834 aa9.87□□□□□ -0.83
SCAMP1-206ENST00000618166 CENPFP49454 3210 aa9.87□□□□□ -0.83
SCAMP1-206ENST00000618166 TRIOBPQ9H2D6 2365 aa9.87□□□□□ -0.83
SCAMP1-206ENST00000618166 PTCD1O75127 700 aaKnown RBP9.87□□□□□ -0.83
SCAMP1-206ENST00000618166 ZPR1O75312 459 aa9.87□□□□□ -0.83
SCAMP1-206ENST00000618166 HHIPL1Q96JK4 782 aa9.87□□□□□ -0.83
SCAMP1-206ENST00000618166 GLIS2Q9BZE0 524 aaPredicted RBP9.87□□□□□ -0.83
SCAMP1-206ENST00000618166 SAGE1Q9NXZ1 904 aa9.87□□□□□ -0.83
SCAMP1-206ENST00000618166 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
SCAMP1-206ENST00000618166 A0A1W2PP64 1363 aa9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 RTL1A6NKG5 1358 aa9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 FAM155AB1AL88 458 aaPredicted RBP9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 FZD9O00144 591 aa9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 PHKG2P15735 406 aa9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 PDE4AP27815 886 aa9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 SCNN1DP51172 638 aa9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 DLK2Q6UY11 383 aa9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 TMC1Q8TDI8 760 aa9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 COL25A1Q9BXS0 654 aaPredicted RBP9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 SLC12A5Q9H2X9 1139 aa9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 GJA3Q9Y6H8 435 aa9.86□□□□□ -0.83
SCAMP1-206ENST00000618166 VCANP13611 3396 aa9.85□□□□□ -0.83
SCAMP1-206ENST00000618166 KIF23Q02241 960 aaPredicted RBP9.85□□□□□ -0.83
SCAMP1-206ENST00000618166 AKAP4Q5JQC9 854 aa9.85□□□□□ -0.83
SCAMP1-206ENST00000618166 GPC2Q8N158 579 aa9.85□□□□□ -0.83
SCAMP1-206ENST00000618166 CACNA1SQ13698 1873 aa9.84□□□□□ -0.83
SCAMP1-206ENST00000618166 TJP1Q07157 1748 aa9.84□□□□□ -0.83
SCAMP1-206ENST00000618166 COL4A5P29400 1685 aa9.84□□□□□ -0.83
SCAMP1-206ENST00000618166 HDGFL2Q7Z4V5 671 aaPredicted RBP9.84□□□□□ -0.83
SCAMP1-206ENST00000618166 COG3Q96JB2 828 aa9.84□□□□□ -0.83
SCAMP1-206ENST00000618166 KIAA1468Q9P260 1216 aa9.84□□□□□ -0.83
SCAMP1-206ENST00000618166 SPG7Q9UQ90 795 aa9.84□□□□□ -0.83
SCAMP1-206ENST00000618166 SPTBN5Q9NRC6 3674 aaKnown RBP9.84□□□□□ -0.83
SCAMP1-206ENST00000618166 SOS1Q07889 1333 aaPredicted RBP9.83□□□□□ -0.84
SCAMP1-206ENST00000618166 HUNKP57058 714 aa9.83□□□□□ -0.84
SCAMP1-206ENST00000618166 C7orf43Q8WVR3 580 aa9.83□□□□□ -0.84
SCAMP1-206ENST00000618166 LMOD1P29536 600 aaPredicted RBP9.82□□□□□ -0.84
SCAMP1-206ENST00000618166 MAP3K9P80192 1104 aa9.82□□□□□ -0.84
SCAMP1-206ENST00000618166 FKBP4Q02790 459 aaKnown RBP eCLIP9.82□□□□□ -0.84
SCAMP1-206ENST00000618166 IFNL2Q8IZJ0 200 aa9.82□□□□□ -0.84
SCAMP1-206ENST00000618166 FBXW7Q969H0 707 aa9.82□□□□□ -0.84
SCAMP1-206ENST00000618166 BRIP1Q9BX63 1249 aa9.82□□□□□ -0.84
SCAMP1-206ENST00000618166 NARFQ9UHQ1 456 aa9.82□□□□□ -0.84
SCAMP1-206ENST00000618166 H0YGN5 161 aa9.81□□□□□ -0.84
SCAMP1-206ENST00000618166 PDE6BP35913 854 aa9.81□□□□□ -0.84
SCAMP1-206ENST00000618166 PKN2Q16513 984 aaKnown RBP9.81□□□□□ -0.84
SCAMP1-206ENST00000618166 CCDC93Q567U6 631 aa9.81□□□□□ -0.84
SCAMP1-206ENST00000618166 PRR5LQ6MZQ0 368 aa9.81□□□□□ -0.84
SCAMP1-206ENST00000618166 USP50Q70EL3 339 aaPredicted RBP9.81□□□□□ -0.84
SCAMP1-206ENST00000618166 ZNF296Q8WUU4 475 aaPredicted RBP9.81□□□□□ -0.84
SCAMP1-206ENST00000618166 LAMA3Q16787 3333 aa9.81□□□□□ -0.84
SCAMP1-206ENST00000618166 BCORQ6W2J9 1755 aa9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 COL15A1P39059 1388 aa9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 NRG2O14511 850 aaPredicted RBP9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 SRGNP10124 158 aa9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 IARSP41252 1262 aaKnown RBP9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 CNKSR1Q969H4 720 aa9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 CSRNP1Q96S65 589 aa9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 RYDENQ9NUL5 291 aaKnown RBP9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 RBM27Q9P2N5 1060 aaKnown RBP9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 TSR3Q9UJK0 312 aaKnown RBP9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 HDAC9Q9UKV0 1011 aa9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 NCAPD2Q15021 1401 aa9.8□□□□□ -0.84
SCAMP1-206ENST00000618166 EN2P19622 333 aaPredicted RBP9.79□□□□□ -0.84
SCAMP1-206ENST00000618166 SOGA3Q5TF21 947 aa9.79□□□□□ -0.84
SCAMP1-206ENST00000618166 TBC1D9BQ66K14 1250 aa9.79□□□□□ -0.84
SCAMP1-206ENST00000618166 STYK1Q6J9G0 422 aa9.79□□□□□ -0.84
SCAMP1-206ENST00000618166 TYW1BQ6NUM6 668 aa9.79□□□□□ -0.84
SCAMP1-206ENST00000618166 FBXO46Q6PJ61 603 aaPredicted RBP9.79□□□□□ -0.84
SCAMP1-206ENST00000618166 DNAJC10Q8IXB1 793 aa9.79□□□□□ -0.84
SCAMP1-206ENST00000618166 TBC1D8O95759 1140 aa9.78□□□□□ -0.84
SCAMP1-206ENST00000618166 RGMBQ6NW40 437 aa9.78□□□□□ -0.84
SCAMP1-206ENST00000618166 SEPT9Q9UHD8 586 aaPredicted RBP9.78□□□□□ -0.84
SCAMP1-206ENST00000618166 ZBTB1Q9Y2K1 713 aa9.78□□□□□ -0.84
SCAMP1-206ENST00000618166 PAPPA2Q9BXP8 1791 aa9.78□□□□□ -0.84
SCAMP1-206ENST00000618166 ARFGEF2Q9Y6D5 1785 aa9.78□□□□□ -0.84
SCAMP1-206ENST00000618166 ERVV-2B6SEH9 535 aa9.77□□□□□ -0.84
SCAMP1-206ENST00000618166 SLC51AQ86UW1 340 aa9.77□□□□□ -0.84
SCAMP1-206ENST00000618166 RAPGEFL1Q9UHV5 662 aa9.77□□□□□ -0.84
SCAMP1-206ENST00000618166 SOX1O00570 391 aaPredicted RBP9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 ZNF157P51786 506 aaPredicted RBP9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 HIRAP54198 1017 aaPredicted RBP9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 CABP4P57796 275 aa9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 DDX27Q96GQ7 796 aaKnown RBP9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 MASTLQ96GX5 879 aa9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 PRKD2Q9BZL6 878 aa9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 EMILIN3Q9NT22 766 aa9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 TERF2IPQ9NYB0 399 aa9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 FLT4P35916 1363 aa9.76□□□□□ -0.85
SCAMP1-206ENST00000618166 EIF6P56537 245 aaKnown RBP9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 LARP6Q9BRS8 491 aaKnown RBP9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 GGNBP2Q9H3C7 697 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 PDZRN3Q9UPQ7 1066 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 TONSLQ96HA7 1378 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 TRIM6-TRIM34B2RNG4 842 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms