RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 IGKV5-2P06315 115 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 CCDC186Q7Z3E2 898 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 STK11IPQ8N1F8 1099 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 FSIP1Q8NA03 581 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 PPP1R9BQ96SB3 815 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZSCAN16Q9H4T2 348 aaPredicted RBP6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 LRP2BPQ9P2M1 347 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 EXOC5O00471 708 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 POLR3DP05423 398 aaPredicted RBP6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 PHKG2P15735 406 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 ME3Q16798 604 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 SLC9C2Q5TAH2 1124 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 PLBD2Q8NHP8 589 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 PI4K2BQ8TCG2 481 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 PAG1Q9NWQ8 432 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 KLF18A0A0U1RQI7 1052 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 A0A1B0GUL7 405 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 CLEC17AQ6ZS10 378 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 Q6ZUG5 572 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 CHST3Q7LGC8 479 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 DNAJC10Q8IXB1 793 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 GPT2Q8TD30 523 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 LSG1Q9H089 658 aaKnown RBP6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 CCDC129Q6ZRS4 1044 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 E9PCH4 1651 aa6.6□□□□□ -1.35
SYNCRIP-204ENST00000616122 SLC27A2O14975 620 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 IL2RBP14784 551 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 TDO2P48775 406 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 HSP90AB3PQ58FF7 597 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 SEC62Q99442 399 aaKnown RBP6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 SSH2Q76I76 1423 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 PDE4DIPQ5VU43 2346 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 UQCRHLA0A096LP55 91 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 TAF5LO75529 589 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 UQCRHP07919 91 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 CCDC112Q8NEF3 446 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 ANKRD18BA2A2Z9 1011 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 CHD1O14646 1710 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 CDKL5O76039 1030 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 CYP2E1P05181 493 aaPredicted RBP6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 HELBQ8NG08 1087 aaPredicted RBP6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 ANO10Q9NW15 660 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 HECW2Q9P2P5 1572 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 MAP1BP46821 2468 aaKnown RBP6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 CYP27B1O15528 508 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 MAP3K12Q12852 859 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 EPHA10Q5JZY3 1008 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 CCDC191Q8NCU4 936 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 UBAC1Q9BSL1 405 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 BCL11BQ9C0K0 894 aaPredicted RBP6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 ZSWIM6Q9HCJ5 1215 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 ABCA9Q8IUA7 1624 aa6.59□□□□□ -1.35
SYNCRIP-204ENST00000616122 BIN1O00499 593 aa6.59□□□□□ -1.36
SYNCRIP-204ENST00000616122 JAK2O60674 1132 aa6.59□□□□□ -1.36
SYNCRIP-204ENST00000616122 SMC2O95347 1197 aa6.59□□□□□ -1.36
SYNCRIP-204ENST00000616122 TYRO3Q06418 890 aa6.59□□□□□ -1.36
SYNCRIP-204ENST00000616122 TTLL7Q6ZT98 887 aa6.59□□□□□ -1.36
SYNCRIP-204ENST00000616122 NUP133Q8WUM0 1156 aa6.59□□□□□ -1.36
SYNCRIP-204ENST00000616122 ZNF594Q96JF6 807 aaPredicted RBP6.59□□□□□ -1.36
SYNCRIP-204ENST00000616122 PTPDC1A2A3K4 754 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 CYP21A2P08686 494 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 SFPQP23246 707 aaKnown RBP eCLIP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 IARSP41252 1262 aaKnown RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 NOLC1Q14978 699 aaKnown RBP eCLIP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 TLR7Q9NYK1 1049 aaKnown RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 HOOK1Q9UJC3 728 aaKnown RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 NSFL1CQ9UNZ2 370 aaKnown RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 ADAMTS13Q76LX8 1427 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 LRRC7Q96NW7 1537 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 PES1O00541 588 aaKnown RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 DNAJC25Q9H1X3 360 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 TPCN1Q9ULQ1 816 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 VWDEQ8N2E2 1590 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 ABCA6Q8N139 1617 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 IL25Q9H293 177 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 NCOA5Q9HCD5 579 aaKnown RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 CTAGE5O15320 804 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 XBP1P17861 261 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 APOBRQ0VD83 1088 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 NCOA7Q8NI08 942 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 LAMC1P11047 1609 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 SLC3A2P08195 630 aaKnown RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 PTPN12Q05209 780 aaKnown RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 NECTIN1Q15223 517 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 TPD52L1Q16890 204 aaPredicted RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 PDILTQ8N807 584 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 C16orf45Q96MC5 204 aaPredicted RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 RAI14Q9P0K7 980 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 IFIT3O14879 490 aaKnown RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 RPS6KB1P23443 525 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 OTUD7BQ6GQQ9 843 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 LUZP1Q86V48 1076 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 CCAR2Q8N163 923 aaKnown RBP6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 SETBP1Q9Y6X0 1596 aa6.58□□□□□ -1.36
SYNCRIP-204ENST00000616122 NLRP1Q9C000 1473 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 ERBB4Q15303 1308 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 MINDY4BA8MYZ0 360 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 RNF113AO15541 343 aaKnown RBP6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 IQSEC3Q9UPP2 1182 aaPredicted RBP6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 IQSEC2Q5JU85 1478 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms